Hibiscus syriacus (Rose-of-Sharon): 120216248
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Entry
120216248 CDS
T09559
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like
KO
K04523
ubiquilin
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120216248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120216248
03051 Proteasome [BR:
hsyr03051
]
120216248
Membrane trafficking [BR:
hsyr04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
120216248
Proteasome [BR:
hsyr03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
120216248
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
STI1-HOP_DP
TBK1_ULD
XPC-binding
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
120216248
NCBI-ProteinID:
XP_039069661
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MGGGDITSAMEAVSQTDAAGDAVTVDISCSPASKFSVQIKLDSTVLSFKALLARNCDIPA
DQQCLIYKGRILKDDQTLQSYGLEADHTVRLVRRFAPTPSPTTTNASGSISSGGSNTSQT
NSRGVGLDDGGTLGPGGAGQKVSLFPGLGFGGLGGSAGLFGAGLPDFEQVHRKLTQNRDI
MTELMNMPTVRNLINDPDMVGNLIMNNPQLAELIDRNPELAHLLNDPAAIHRTLEAARNP
ELMREILRNSDRAMSNIVSFPEGFNTLHRIYETVQEPFMNSTTLAGPTGNGGTDPFAALL
GSQGGNQVRDRSTNQSSPASGTTDSPAPNTNPLPNPWSSSAGGGAQTNTTRSDHSADSRP
QAPSGLGGLGLPSFEGLFGAMQDTNSLNQLMQNPIISPMMQSLLSNPSIHEPGSCS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaggtgatattacttctgctatggaagcggtcagccaaaccgacgccgccgga
gatgccgtcactgtcgatatcagctgttcccccgcctccaaattctccgttcagatcaaa
cttgattccactgtcctttctttcaaggcacttctggcgcgcaactgcgatattcccgcc
gatcagcagtgtttgatttacaagggccgaatcttgaaggacgaccaaacacttcaaagc
tacggtttggaggcagatcacaccgtccgcttggttcgtcgttttgcaccaacaccatca
ccaacaacaaccaatgcatctgggtcaatcagttctggcggttcgaacacctctcaaaca
aattcaaggggtgtcggcttagatgatggcgggacattgggaccaggaggagctggtcaa
aaggtttcattgtttccgggacttggctttggaggcttaggtggcagtgctggtttattt
ggagctgggctcccagattttgaacaagtacaccggaaattaactcaaaaccgcgacatt
atgacagaacttatgaatatgcctactgttcggaatttaataaatgatcctgatatggtt
ggaaacttgatcatgaacaatcctcaacttgcagagttaatcgaccgaaatcctgaactt
gcacacttacttaatgatccagctgctatccatcgaacacttgaagctgcaagaaaccct
gagctcatgcgtgaaatattgaggaattcagatagagcaatgagcaacatagtatcattt
ccggaaggatttaacacgcttcaccggatttatgaaactgttcaagagcctttcatgaat
tcaaccaccttggctgggcctactggaaatggtggtacagacccatttgctgccctccta
ggatctcaaggagggaatcaagtcagagataggtcaactaaccagtcctcgccggcttct
ggaactactgattcaccagctcctaatacaaatccactaccaaacccttggtcttcttct
gcgggtggaggtgcccaaactaacactacaaggtcggatcatagtgcagattctaggcca
caggcaccttcagggttaggtggtcttggtcttccatcgtttgaaggcttgtttggtgct
atgcaagatactaattcactgaatcagttgatgcaaaaccctattatttctccaatgatg
caaagcctcctgtccaacccctcaatacatgaaccaggctcttgctcttag
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