Hibiscus syriacus (Rose-of-Sharon): 120216529
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Entry
120216529 CDS
T09559
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
120216529
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
120216529
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
EMC7_beta-sandw
Y_Y_Y
RhgB_N
CBM27
Motif
Other DBs
NCBI-GeneID:
120216529
NCBI-ProteinID:
XP_039069850
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All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MESRRLLVLWVTMMIELSLFVSVLCAEIPPRFSSYYHLLHLNFSASTVHGKRKERDREKE
IAFMAVALGKLLRDHDSDTHVRLQINHREVIIDNGLVRVTIENPSGYLEGIKYKDIRNVF
ERRNNNDNRGYWDIVWDGGAYDRLETKHVEVITQTDDLVEISFTKKWHSRDHGRTLPLNI
QKRYIVQRGIPGVYMYGVFEREADFPEANMYQIRIVFKLREDKFRFMVVSDTIQRIMPRP
EDRDEHRSQALAFKEAVLLTNPSNPSLKGEVDDKYQYSTENKDNKLHGWISDDDAVGFWV
ITPSNEFRNGGPHKQDLTSHVGPTALSMFVSTHYTGTEMDTFYKQGEAWKKVFGPVLIYL
NSASSKDDHSKILWNDAKRQLSEEIGRWPHNFTRSEDFPHSEQRGQVNGQLLVRDRYMAK
ELMQAKSAFVGLAAPGAAGSWQTEGKGYQFWTQTDNSGHFSIKNVRPGEYNLYAWVRGFI
GNYKLDLNITIQTGSKIELGTLIYDPPRNGPTLWEIGVPDRSAAEFFIPEPSPQFMNSIT
KDYTDKFRQYGLWDRYSDIYRDGDLVYTVGTSSYSRDWFFAHVPRQTGNNTSRATTWQIK
YNLQDVNERGTYTLRLALAAASYAEVQVRFNNPNARRPYFTTRRIGYDNVVPRHGIHGLY
RLYSINVPGYRFREGDNTIYLTQTRSRNSFEAVMYDYIRLEGPSS
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaggaggctgcttgttttatgggtgacaatgatgattgagttgtcgcttttt
gtctctgttctctgtgccgaaatcccacccaggttctcttcctattatcacttacttcat
cttaatttctcagcctcaacagttcatgggaaacggaaagagagagacagagagaaagag
attgcttttatggctgttgctttaggaaaactcctaagggatcatgacagtgacactcat
gttcggttacaaataaatcaccgcgaggtgattattgacaatggactcgttagagtcacc
atcgagaatccatctggttatttggaaggaattaaatataaggatatacggaatgtgttc
gaaaggagaaacaacaacgacaatagagggtactgggacattgtgtgggatgggggtgcc
tatgacagactggaaaccaaacatgtcgaggtcataacacaaactgatgacctagtagag
atttcctttactaaaaaatggcactctagggaccatggcaggacacttcccttaaatata
cagaaaaggtacatagtccaacgcggcattccgggggtctacatgtacggtgttttcgag
cgcgaggcggattttccggaggctaacatgtaccaaataaggattgtgttcaagctcagg
gaagacaagtttcggttcatggtggtatcggacacgatacaaaggatcatgcctcgtccc
gaagatcgggatgaacatcgaagccaggctcttgccttcaaagaagctgttctactgacc
aatccatccaatccaagccttaagggagaggttgatgacaagtaccaatattctaccgag
aacaaagacaacaagcttcacggttggatatccgatgacgatgctgtcggtttctgggta
ataactccaagcaatgagttccgaaacggtggcccgcacaaacaggacctcacttctcat
gttggtccgactgctctttcgatgtttgttagtacacattataccggaaccgaaatggat
acattttataagcaaggagaggcctggaaaaaggtttttggtccggttttaatctacctt
aattccgcgtcttcaaaagatgatcacagcaagatcctctggaatgatgctaagagacag
ttgagtgaagaaattggaaggtggcctcataatttcactcgatcagaagattttcctcac
tctgaacaacggggacaagttaatgggcaattgctagtgcgagaccggtacatggctaag
gaattaatgcaggcgaaatccgcctttgtggggctggctgcccctggagctgcaggttca
tggcaaacagaaggaaagggctaccagttctggactcaaactgacaatagtggccatttc
agtataaaaaatgtccgaccaggggagtataatttgtacgcttgggtccgtggtttcatt
gggaactacaaattagacctgaacatcactatccaaacaggaagcaagatcgaattgggt
acacttatctatgatcctccaagaaatggccccacattgtgggaaatcggagttcccgac
aggtcggcggccgagttcttcattcccgaaccatccccacaattcatgaactcaattacc
aaagattacactgacaagttcagacaatacggattgtgggatcggtactcagatatttat
cgtgatggtgatcttgtctacactgtgggcacaagcagctactcgagggattggttcttt
gctcatgttccaaggcaaacagggaacaatactagcagggcaacgacatggcaaatcaaa
tacaatctccaagatgtaaacgagagaggaacttacactctccgattggcattggcagcg
gcttcttatgctgaagtacaggttcgattcaacaatccgaatgcccgccgaccttatttt
actaccagaagaatcggttacgataatgtcgtaccaaggcatggaattcatggactctac
agattgtacagcattaatgtacctggatacagatttcgtgaaggggacaataccatctat
ctaactcagacgagaagcagaaactcttttgaagcggttatgtacgactacattcgatta
gaagggcctagcagttag
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