Hibiscus syriacus (Rose-of-Sharon): 120217188
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Entry
120217188 CDS
T09559
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B-like isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120217188
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120217188
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
120217188
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
120217188
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PTM_DIR17_Tudor
TOR1L1_N
TPR_DNAAF5
HetE-N
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
120217188
NCBI-ProteinID:
XP_039070317
LinkDB
All DBs
Position
Unknown
AA seq
1679 aa
AA seq
DB search
MSEKLEEQLKELGSKLESPPSSKDALLKLLKQAATCLSEIDQSPPSSTMESMQLLLNAIV
KPELLKHQDQDTELLVATCICEITRITAPDAPYSDDILKDIFNLIVGTFNGLSDTSGPSF
GRRVVILETLAKYRSCVMMLDLECDDLVNEMFSTFFAVVRDDHPESVLSSMQTIMTVVVE
ESEDVRDDLLLVILSALGRNKSGVTQAARRLAMNVIEQCSEKLEAGIKQFLISVMSGDNQ
PVKSEIDYHEVIYDIYHCASQILSGVIPYLTGELLTDQIDTRLKAVRLVGSLFALPGSII
SEAFQPIFSEFLKRLTDRVVDVRMSVIGNVKICLLSDPSRPEAPRIISALCDRLLDYDEN
VRKQVVDVICDVACHSLVSVPVGTIKLVAERLRDKSLLVKKYTMERLAEVFRVSCAGCSD
GSIDRYEFDWIPGKIFRCFYDKDFRSETIESVLCGSLFPTEFSIRDKVKCWIRVFSGFDK
IEIKALERMLEQKQRLQQEMQRYLSLRQRHQDSDAPEIQKKVLFSFQIISRSFSDPVKAE
ESFQTLDRLKDSNIWKILLNLLDPNTSFHQAFSGRDELLKILSESHQLYDFLSMLSLKCS
YLLFNKEHVKEILLEVTVQKSAGNTLYIRSCMNILVILARFSPSLLGGAEEELINFLKDD
NETIKEGILHVLSKAGSTIREQLAVSSSSIDLILERLCLEGNRRQAKYAVHALGAITKDD
GLKSLSVLYKSLVDMLEEKTHLPAVLQSLGCIAQTAMPVFETRESEIEEFIKSKILRCSI
DSDGSAKECWDDKSELCMLKVFGIKTLVKSYLPVRDAQLRPAIDDLLGLLRNVLSFGEIS
EDIKSSIVDKAHLRLAAAKAVLRLSRNWDHKIPVDIFYLTLRIAEISFPQARKQFLNKVH
QYIKDRLLDAKYACAFLLSVPGSKQLQFDEQEKQNFADIFQMYQQARVRQVAIQSDTSCS
TSYPEYILPHLVHALAHHSCPNTDECKDVKAFELTYRKLYLIISLLVNKDEDVKSEACAN
REKESISLIFSIFKSIKQSEDVVDATKSKNSHSICDLGLSIMKRLAYKEDDLQGLIQSVS
LPPLLYKPYERKEGEDSLAGERQTWLADESVLSHFESLTLECDGMKEISKEEILGDSETE
RNEVPLRKMIKQLKSKESKAGKAKKKSPSVEAKDAENDVDILKMVREINLDSLQMSSKFE
STNGHKHSYTKKEKVEQEHQKGNKRKGNVAASVPVPKRKRSSSTHSASKISRSASKVPSR
DSGDDWHEVKDSSFLSKEMDIVKFHNSKEKMPARKRWNENKDSNYLVPSIRKKRSFSSKV
KVKGSDWSHIDDDNEDEADDENLEKSDTSKSAAGSSKKQKSIAGLAKCSTKEDGVDITDL
IGYRIKVWWPLDKQFYEGTIKSYDPIKKKHVILYDDGDVEVLCLERERWELIGTDRKSGK
KENSAKVSKSPLKEASPGQKSKSSAGPRLNKSSVKTPKGKRTPKKNLKHTQKSTLKEDEE
NAGTSESKSIAVNENPKMNSDESGADAKMVDETVMERGESGKKVASVSQGRCSEDTKGSP
NNDTKESDEVKSDADGNHSGHIDSTLENAQKVGEEEKAADGLSEDSREPASKATGPEPKE
AQESDQVGGKSPILKKSWEGPPLTSDVADSGISDDEPLVLHLASKWKHKVGKPGSKKLQ
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagaagctggaagagcagctcaaggagctgggatccaagctggaatctcctcca
tcctccaaggacgcacttctcaagctcttaaagcaagctgctacatgtctttctgagatt
gatcagtctccgccatcatcaacaatggaatcaatgcagcttctgcttaatgcgattgtc
aagccagaactgctgaagcatcaagatcaggatactgaacttctagttgcaacctgtatt
tgtgagataactcggataactgcacctgatgcaccttatagtgatgatattctaaaggat
atttttaacttgattgttggcactttcaatggattgagtgatacgagtggtccatcattt
ggaaggagagttgtaattttggagacacttgcgaaatacagatcttgtgttatgatgttg
gatcttgaatgtgatgatttggttaacgaaatgttcagtacattttttgctgttgtcagg
gatgatcatccagaaagtgttttatcatccatgcaaacaatcatgactgtggttgtagaa
gagagtgaagatgttcgtgatgatcttttgcttgttatattgtctgcactaggtcgtaat
aaaagtggtgttacacaagctgccaggagacttgctatgaatgttatagagcagtgttca
gaaaaacttgaagctggcataaaacagtttcttatttcagtgatgtctggagataatcag
ccggtaaaaagtgaaattgactatcatgaagttatctatgatatttatcattgtgcttct
cagatactgtcaggagttatcccatacctcacaggagagctgttgactgatcaaatagac
actcgtttgaaagctgtgagattggttggttccctctttgcactgcctggctctatcata
tctgaagcgtttcagccaatattttcagaatttttgaagaggttaactgatagagttgtt
gatgttcgaatgtccgtcatcggaaatgttaagatctgtctgttgtcggatccttcgaga
cctgaggcaccacgaattatctctgcactatgtgatcggcttttagactatgatgaaaat
gttcggaagcaagttgtggatgtaatttgtgacgttgcttgtcattctcttgtttccgtt
cctgttgggactataaaactagttgcggagcgtcttcgagacaaatctctgcttgttaaa
aaatatactatggaaaggctggctgaggtgttcagagtttcttgtgctggatgctctgat
ggctcgatcgatcgttacgaatttgattggatacctgggaagatatttaggtgtttctat
gacaaagatttcaggtcagaaacgatcgaatctgttttatgtggatccctatttcctact
gaattctcaatcagagataaagttaaatgttggataagagttttctctgggtttgacaaa
attgagatcaaggcacttgagaggatgctagaacagaagcaaaggttacagcaagagatg
cagaggtatctctctctaaggcagaggcatcaggatagtgatgctcctgaaatacaaaag
aaagttttatttagcttccaaatcatttcccgttctttttctgatcctgtgaaggctgaa
gagagttttcagacacttgatcggttgaaagattctaacatctggaagattttattgaat
ctattggatcccaataccagcttccatcaagcttttagtggtcgggatgaattgcttaaa
atactttctgagagtcaccaactctatgattttctgagtatgctctctctgaagtgttct
tatctactttttaacaaggagcatgtgaaagaaatcctcctggaggttactgtacagaag
tctgctggaaacacactatacattcggtcttgcatgaatatacttgtgattcttgcgcga
tttagtccatcacttcttggtggagctgaagaagaactgattaattttctgaaagatgac
aatgaaactataaaagaaggcattttgcatgttttgtctaaggctggtagtaccatccga
gaacaacttgcagtgtcatcaagttcaattgatcttatattggagaggctttgtttagaa
ggtaatcggagacaggccaagtatgcagtgcatgcactgggagcaataacaaaggatgat
ggactcaaatctctctctgttttatataagagccttgtggacatgctggaggaaaagaca
catttaccggcagtacttcagtctctgggatgtatagctcagactgcaatgcctgttttt
gaaaccagagagagtgaaattgaagaatttattaaaagcaaaattttgagatgcagtatt
gattcagatggcagtgcaaaagaatgttgggatgacaaaagcgaactctgtatgttgaag
gtatttgggataaagacattggtcaaaagctacttgcctgtcagagatgctcagcttcgt
cctgctattgatgatcttctaggactccttagaaacgtactttcttttggtgaaatatct
gaagatataaaatcaagtatagttgataaagcccatttaaggcttgctgcggccaaggca
gttcttcgtctgtcccggaactgggaccataagattcctgttgatatcttctatttgacc
ttgaggatagcagagatctctttccctcaggcaaggaaacaattcctcaacaaagttcat
caatatataaaggacagactcttggatgcaaaatatgcttgtgctttcttacttagcgta
cctggatccaaacagcttcagtttgatgagcaggaaaaacagaattttgctgatatcttt
caaatgtatcagcaagcaagagttcggcaggttgccatacaatctgatacaagttgctcg
acgtcttatcctgaatacatcctgcctcatttggtacatgctcttgctcatcattcctgt
cccaacacagatgaatgcaaggatgttaaagcatttgaattaacataccggaaattgtac
ttgattatttctttgttggtgaataaagatgaagatgtgaagtcagaagcttgtgctaac
agggagaaggagagtatttctttgatattctctatctttaagagtatcaaacaatctgaa
gacgttgttgacgcaacaaaatcgaagaattcacattctatttgtgaccttggactttcc
atcatgaagcgcctagcttataaggaggatgatttgcaagggcttatacagtcagtctct
ctgcctccactcctgtacaaaccatatgaaagaaaagaaggtgaagattccctggctgga
gaaaggcaaacatggttagctgatgagagtgtcctgtctcacttcgaatccctaacattg
gaatgtgatggaatgaaagagatttccaaggaggagattcttggagacagtgaaactgaa
agaaatgaagtgcctctcagaaaaatgattaagcaattaaaatccaaagaatccaaggct
gggaaagctaaaaagaagtctccctcggtcgaagcaaaagatgcggaaaatgatgttgat
attttgaaaatggttagggagataaatttggatagtctacagatgtccagtaagtttgaa
tcaaccaacggtcataaacattcatataccaagaaagaaaaagtggagcaggagcatcag
aaaggtaataagagaaaaggcaatgttgctgcttctgtcccagtgcctaaacgcaagagg
tcatcgtctacacatagtgcttccaaaatttctagaagtgcttctaaggtcccttcaagg
gattcaggagatgactggcatgaagttaaagattcctcgtttctatctaaggaaatggac
attgttaaattccacaattcaaaagagaaaatgcctgcacgcaaaagatggaatgagaat
aaagattctaactacttggtaccgagcattcggaagaaaagaagcttctcatcaaaagtc
aaagtcaaaggctctgactggagtcatattgatgatgacaatgaagatgaagctgatgat
gaaaatcttgagaagtcagacaccagcaagtctgcagctggatctagcaagaagcagaag
agcattgctggattagcaaagtgctcaacgaaggaagatggagttgatattacagatttg
attggttacagaataaaagtgtggtggcctttggataagcagttttatgaaggtacaatt
aagtcttatgaccctataaagaagaagcatgtgatattatatgatgatggagatgtggaa
gtactttgtctggaaagagagcgttgggagctcattggcacagaccgcaagtctggaaag
aaggaaaattcagcgaaagtcagtaagagccctctgaaggaagcgtctcctgggcagaaa
agtaagagctcagctggtccacgtctgaataagagttcagtaaagacacctaaggggaaa
aggactccaaagaagaacttgaagcatactcaaaagagtacattgaaagaagatgaagag
aacgctggtacgtcagaatccaagtccattgctgttaacgaaaatcctaagatgaactcg
gatgaatctggagcagacgccaaaatggtagatgagaccgtaatggaaagaggagaatct
gggaagaaagtggcttcagtttcccaaggcaggtgttcggaagatacaaaaggaagccca
aataatgacaccaaggagtcggatgaagttaaatctgatgccgatgggaatcattctgga
catatagatagcactttagaaaatgctcaaaaggtgggtgaggaagagaaagcagccgat
ggattaagtgaagactctagagaacctgctagtaaagcaactggaccagaacctaaagag
gctcaagaaagtgatcaggttgggggtaaatcaccgatcttgaagaaatcatgggaagga
cctcccttgacttcagatgttgcggattctgggatttctgacgatgagccccttgtacta
catctagcaagcaagtggaagcataaagttggaaaaccaggttccaaaaaattgcagtag
DBGET
integrated database retrieval system
