Hibiscus syriacus (Rose-of-Sharon): 120217288
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Entry
120217288 CDS
T09559
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1-like
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsyr04812
]
120217288
Cytoskeleton proteins [BR:
hsyr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
120217288
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Katanin_con80
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_Aladin
NBCH_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_EIPR1
eIF2A
Beta-prop_Vps41
Beta-prop_WDR41
Beta-prop_IFT122_1st
Beta-prop_ACSF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
120217288
NCBI-ProteinID:
XP_039070390
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MVLWDIEYKYNGLSLRDNVQSLCGHTSPVESLAFDLAEVLVLAGASSGVIKLWDLEETKM
VRGLIGHRSNCTALEFHPFGEFFASGSMDTNLKIWDIRKKGCTHTYKGHTRGISTIRFTP
DDRWVASGGFDNVVKMWDLTAGKLLNEFKFHEGHISSLDFHPLEFLLATGSTDGTVKFWD
LETFELIGSSRPEAVGVRSITFHTDGKTLFCGSDNDLKVYSWEPVVCHDSADIGWSTLGD
LCINEGKLLGCSYYRNSIGVWGADLAHIEPYGRNGRSEKKFNLEGSYSLEKAGSGMRSTL
GSRPLSPDYETKEIKNIYVDISSLTSSLMIHINVKKGGTQISKTDPMSANNISPVESLIS
TTESASGSEGGITRSPIPRRETTPTSDRIITGDRISRRESTFTSDRMTARNQSSRKESTV
ASNRIVTVNQISRRGSNYASSGSITGNLISRRESTSASDGIITKNQITQSESTSISVGII
SGNKLSRNDMSRPTGLVTEIQISMGALSSGNDGNVTIIESQISKGESISANDEKLTESLM
QTHDVFLSTLRSRLTKLQVVRHFWEKNDIKGSIGAVRKLPDHSVQADVIGVFMEKMEILT
LDLFSVLLPVLIGLLDSKMERHAGVIRACTCLVAVFGPMIRSTVSAPRGVGVDLHAEQRR
ECCSQCYMQLQKIQNLLPALVRRGGTVARCAQELNLVLQE
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggtattgtgggatattgaatacaagtataatggtctatccttacgtgataatgtgcag
agtctttgtggtcatactagtccggtcgaatctttagcttttgatttggctgaagtcttg
gtgcttgctggtgcatcttcgggtgtgataaagctttgggatctcgaagaaacaaagatg
gttcgcggacttattggacacagatctaattgcactgctttggagttccatccatttggt
gagttttttgcatctggttccatggatacaaatctaaagatatgggatatcagaaaaaaa
ggatgcactcacacatataagggtcatactcgaggcattagcacgattagattcactcct
gatgaccgctgggtggcttctggtggatttgataatgttgtaaagatgtgggatcttacc
gctggaaaactcttgaatgagtttaagtttcacgaagggcatatttcctccttagacttc
catcctcttgagtttctccttgctacagggtccacggatggaacggtaaaattctgggat
ttggaaacttttgaactgattgggtcttcaagaccggaggctgtgggggttcgctcgatt
acctttcatactgatgggaaaacccttttctgtggatcagacaatgatttgaaggtttat
tcatgggagccagtagtttgtcatgattctgctgatattgggtggtcaacacttggtgac
ctctgcatcaatgaaggcaaacttctgggttgttcgtactatagaaattctattggagtt
tggggagcagacttagcgcatattgagccatatggccgaaatggacgttctgagaagaaa
tttaatcttgagggaagttattctttggagaaagctgggagtggcatgaggtcaactttg
ggatcacggcccctatcgcctgattacgagaccaaggaaataaagaacatttatgttgac
atttcgagtttgacttcttctctgatgatacatataaacgtgaagaaaggaggaacacaa
atatctaaaacggaccctatgtcggccaataatataagtcctgtcgaaagtctaatttct
acaacggaatcagcttctggctctgagggtggcattactagaagtccaattcctagaagg
gaaacaacccctacttctgacaggataattactggagatcgaatttctagaagggaatca
actttcacctcagataggatgactgctcgaaatcaaagttctcgaaaggaatcgaccgtt
gcatctaataggatcgttactgtaaatcaaatttctagaaggggatcaaattatgcatct
agtggaagcattactggaaatctaatttctagaagggaatcaacctcagcttctgatggg
atcattaccaaaaaccaaatcactcaaagtgagtcaacttccatttctgttgggatcatt
tcaggaaataaactttctagaaatgatatgagtagaccaactggtttagttactgaaatt
caaatttctatgggggcattgagttctggtaatgatgggaatgttacaattatcgaaagc
caaatttcaaagggtgaatcaatctctgctaatgatgaaaagctaaccgaaagtctgatg
caaacgcatgatgtattcttaagtactctccggtcacgcttgacaaagttacaggtagtg
cgacatttttgggaaaagaatgacattaaaggttctattggtgctgtgcggaaactgcct
gatcattctgtgcaagccgatgtgatcggtgttttcatggaaaaaatggagattctcacc
ttagatctgttttccgttctgcttcccgtgcttatcggcttattagatagcaaaatggaa
aggcacgcaggtgttattcgggcatgtacatgtctcgtagcagtttttggtccaatgata
cgctcaactgtttcagccccgcgtggtgtcggtgttgatcttcatgccgagcagaggcga
gaatgctgcagtcagtgttatatgcagctgcaaaagattcaaaatcttcttccagccctt
gtaaggagaggtggcacggttgcgagatgtgcacaggaattgaatctagttcttcaagaa
tga
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