Hibiscus syriacus (Rose-of-Sharon): 120218554
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Entry
120218554 CDS
T09559
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsyr03009
]
120218554
Enzymes [BR:
hsyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120218554
Ribosome biogenesis [BR:
hsyr03009
]
Eukaryotic type
Pre-60S particles
Helicases
120218554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
P-loop_SecA
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
120218554
NCBI-ProteinID:
XP_039071408
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MARENKLFISSKAELKRKQKEKKKAKSGGFESLNLSPNVYRGIKRKGYRVPTPIQRKTMP
LILAGSDVVAMARTGSGKTAAFLVPMLEKLKQHVPQGGVRALILSPTRDLALQTLKFTKE
LGKFTDLRISLLVGGDSMESQFEELAQNPDILIATPGRLMHHLAEVDDMSLRTVEYVVFD
EADSLFGMGFAEQLHKILTQLSENRQTLLFSATLPSALAEFANAGLQDPQLVRLDLETKI
SPDLKLVFFTLRQEEKHAALLYLARDHISSDEQTLIFVSTKHHVEFLNSLFREEGIEPSV
CYGDMDQDARKINISKFRSRRTMLLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVG
RAARAGRTGTAFSFLTSEDMPYLLDLHLFLSRPIRAAPTEEEVLQDMDGVMNKIDQAIAN
GESVYGRFPQNIIDLISDRVRDMIDSSEELNNLQRTCTNAFRLYSKTKPLPARESIKRAK
DLPREGLHPIFKNVLEGGELAALAFSERLKAFRPKQTILEAEGEAAKSKHLQWVDVMKKK
RDIHEKIINLVHKQRSSKHVEKEIQSDDDSPKINEIKEARGSKRKARNFKDEEYYISSVP
TNHHTEAGLSVRSNEGFGSNRLESAVLDLVADDSGGMHKQKSRYHWDKRGKKYVKLNNGE
RVTASGKVKTESGARVKAEKTGIYKKWKERSHRKVNLKGTINGENAEARASSSGDYRSRG
YGRKFGGNKKPQHSVPNAHVRSEIKDLEQVRKERQEKANKLSYMKSKANKKKGKNFGRGG
GGKRGKSK
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggctcgggaaaacaagcttttcataagctccaaagcggagcttaaacgaaaacagaag
gaaaaaaagaaggcaaaatctggcggtttcgagtccttaaacctcagccctaatgtctac
agaggaatcaagcggaagggatacagagtcccaacgccaattcagcgcaagactatgcct
cttattcttgctggaagcgacgtcgttgccatggcccggacaggttcgggaaaaacggcg
gcttttttggtccccatgctggagaagctgaagcagcatgtgcctcagggcggtgtccgg
gctctcattttgtctccgacaagggatttggccttacagacattgaagtttaccaaggaa
ttgggaaaatttacagatcttcgaattagtttactcgttggtggtgatagcatggaaagc
cagtttgaggagttagcacagaaccccgatattttaattgctactcctggtagactgatg
caccacctggctgaagttgatgatatgtcactccgaactgtggaatatgtggtatttgat
gaagcggattccctctttggcatgggttttgctgaacaattgcataaaattcttacccag
cttagtgaaaaccgtcagaccttgctctttagtgcaactttaccaagtgcccttgcagag
tttgctaatgccggtctacaagaccctcagcttgtgcggcttgatttagaaaccaagatt
agtcccgacttaaagcttgttttcttcaccttacgccaggaagaaaaacatgccgcactg
ttgtatttggcaagggaccacattagctctgatgagcaaactttgatatttgtttccacg
aaacatcatgtagagttccttaatagtttatttcgagaggagggtatcgaaccttccgtg
tgttatggtgatatggatcaagatgctcggaaaattaatatttcaaaattcagatcaagg
agaactatgctacttattgtgacagatgttgctgctaggggtattgacatacctttacta
gataatgttatcaactgggacttccctccaaagcccaaaatttttgttcatcgtgttgga
cgagcagcaagggcaggtaggactggtactgctttttcctttttgacatctgaggatatg
ccgtaccttctagatcttcatctatttctgtcaagaccaatcagggctgcacctactgaa
gaggaggttttgcaagacatggatggggtgatgaataaaattgatcaagcaattgcaaat
ggagaatctgtttatggtcgtttcccccaaaacattattgatcttatttcggatagggtc
agggacatgattgattcatctgaagaactaaataatttgcaaaggacatgtacaaatgct
tttcgcttgtattccaagactaaacctttgcctgcaagggagtctattaaaagggcaaag
gatttgccccgtgaagggttgcatcctatcttcaaaaatgtgctggaaggtggtgaattg
gcagcgcttgcattttctgaacgtttgaaagctttcagacccaagcaaaccattctggaa
gctgaaggtgaagccgctaaatcaaagcatttgcagtgggtcgatgtgatgaaaaagaag
agagatatacatgagaagatcattaatttggttcataagcagcgctctagcaaacatgtg
gaaaaggaaattcaatctgacgatgattctccaaagataaatgagataaaagaagcacgc
ggttctaaaagaaaggcaagaaatttcaaggacgaggagtattacataagttctgtacca
acaaatcaccatacagaggctggtctctcagtaagaagtaatgaagggtttggatcaaat
aggttggaatctgctgtactggatcttgttgctgacgatagtggaggcatgcacaaacaa
aaatcaagatatcattgggataagaggggtaaaaagtatgttaaattgaataacggtgaa
cgtgttacagctagcggaaaggttaagacagagagtggtgccagagtaaaagctgagaaa
acaggaatctacaagaagtggaaagaacgatctcacagaaaagttaatctcaaaggaact
attaatggagagaatgctgaggctagagcaagttcatcaggagattaccggtcgcgtggt
tatggtagaaagttcggaggaaataagaaaccgcagcactctgtgcctaatgctcatgtg
cgttcagagatcaaagatttggaacaagtgcgaaaggaaaggcaggaaaaggcaaataaa
ttgtcatatatgaagagcaaagccaacaagaaaaagggtaaaaatttcggtcgaggtgga
ggtggtaaaagaggaaagtccaagtag
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