Hibiscus syriacus (Rose-of-Sharon): 120219024
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Entry
120219024 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: preprotein translocase subunit SCY1, chloroplastic
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03060
Protein export
hsyr04141
Protein processing in endoplasmic reticulum
hsyr04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
120219024
04141 Protein processing in endoplasmic reticulum
120219024
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120219024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120219024
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hsyr02044
]
120219024
Membrane trafficking [BR:
hsyr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
120219024
Secretion system [BR:
hsyr02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
120219024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SecY
TssN
GPHR_N
Motif
Other DBs
NCBI-GeneID:
120219024
NCBI-ProteinID:
XP_039071820
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MLITVREASSWPLSFNLSYPKPSTLRNYVCRASLTVHPKPNSNSQSWNLGLVSNSQKGSV
FDPLGINPDISSGLNGVWGSFLALLEPTFESTSGTRKDKSSSARGVAAAIEDSSIEFRDF
FKGPLPGKFLKLLAFLALSRLGVYIPLGGVNXEAFVGNLDQNSLLSTLDSFSGGGIGRLG
ICSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQ
VLYLRPYVNDFSTQWVLSSVTLLTLGAVLTTYIGERISDLKLGNGTSLLIFTNILSYLPA
SFGRTVAQAYQDGNYVGLVAIVISFFLLVLGIVYVQEAERKIPINYASRYTSRSGGLQKS
AYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGISVLKKAALALNPGGSLYLPTNILLIA
FFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAYLKTVLSRISVLGSVFLAILAA
GPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYEIDRYGP
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgttgataacggtcagagaggcttcttcttggcctctttccttcaacctctcttatccc
aaaccttcaacactcagaaactatgtttgcagagccagtttaactgtccacccaaaaccc
aactccaactcccaatcatggaaccttggtcttgtttctaacagccaaaaaggatctgtt
tttgatcccttgggtatcaatccagatatctcttccggtttaaatggtgtttggggaagt
tttctagccttgttagaacctacatttgagagcacctcaggtacaagaaaggataaatct
tcttcagctcgtggagtggcagctgcaattgaggacagttccattgagtttagggacttc
ttcaaaggcccattaccaggaaaatttctcaagcttttagcatttttagccttatcccgt
cttggagtttatatacccctaggaggggttaacngagaggctttcgttggcaatctagat
cagaacagtcttctgagcacgttggattcattctctggaggaggcattggtagacttggt
atatgctccctcggtattgttccttttatcaatgcacaaattgtgtttcaactccttgcc
caagtttaccctaaattgcaagatcttcagaaaagagaaggcgaagcaggaaggaagaaa
gttcttcagtatactagatatgcctcggttggttttgctatagtacaggcaattggccaa
gtactttaccttcgtccatatgttaatgactttagcacacagtgggttctgtcttctgtc
acccttttgacgcttggtgctgtactgacgacatatattggggaacgaatttctgatctt
aaactgggaaatggcacatcccttttaatatttacaaatattctatcctacttgccggca
tcttttggaaggacagttgcacaggcatatcaggatggtaactacgttggacttgttgcc
atcgttatctcattcttcctgttggtccttggcatcgtctatgttcaggaagcagagagg
aagattccaatcaattatgcctcaagatacaccagcaggagcggagggcttcagaaatct
gcttacctaccctttaaggtaaacagttctggagtgatgccaattatattttccacatca
tccctagcacttcctggtactttggcaagatttacaggaatatctgtgctaaagaaggct
gcactggctttgaatcctggaggttctctctaccttcctaccaatatcttgttgatagcc
tttttcaattactactacacttttcttcaactggaccctgatgatgttagcgaacaactg
aagcgtcaaggcgcttcaattccactggtccgacctggtaaaagtaccgcagcatatcta
aagacggttcttagtcggatatcagtcctaggttcagtatttttagcaatcctagctgct
ggtcctgccgtgattgagcaaacaacacacttgactgcattccgaggatttgcaggcact
tcagttcttattcttgtgggatgtgcaaccgatacagcaagaaaagttcaagcagagatt
atatctcagaagtacaagaacattgagttttacgaaattgacaggtatggcccttga
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