Hibiscus syriacus (Rose-of-Sharon): 120219143
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Entry
120219143 CDS
T09559
Name
(RefSeq) amino acid transporter AVT1C-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120219143
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsyr02000
]
120219143
Transporters [BR:
hsyr02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
120219143
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
120219143
NCBI-ProteinID:
XP_039071946
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MNIMQVSQHPKSTKPQGKEKINRILQYKKVGKKMKKSESDHSFYIESEEEEDEEKVFNGE
AVDGNESDASDSSAENQQQIKPDSYNTPWPQSYRQSIDLYSSVPSPNIGFLGTPTLSRLS
SSYLSSSLTRRHTPESLSAATKPLLPNVDDQIQPHGRSSHTLLPPIPSRRHSSRFDGKTS
KVSHEIPLPRQCSYGQAVLNGINVLCGVGILSTPYAAKEGGWLGLIILFTFALLSFYTGL
LLRQCLDSQPGLETYPDIGQASFGTSGRIALSIILYVELYACCVEYIILEGDNLASLFPN
AYISWGGFELSPQRLFALVTTLAVLPTVWLRDLSVLSYISAGGVVASIMVVLCLFWVGLV
DKVGFHNKGTPLNIATLPVAVGLYGYCYSGHAVFPNIYSSMAKPNQFPSVLLACFAICSL
LYAGTAVMGYTMFGEATESQFTLNMPKDLIASKIAVWTTVVNPFTKYALTMSPVAMSLEE
LIPSSHLKSHIYAILIRTSLVISTLIVGLTIPFFGLVMSLIGSLLTMLVTLILPPACYLS
ILRGKVTRFQATLCIMVIAVGVVSSVFGTYSALSKIVENLRS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaacattatgcaggtgagtcagcatcccaaatcaaccaaaccacaaggaaaagaaaaa
attaatcgaatacttcaatataagaaagttgggaagaaaatgaagaagtcagagtcggat
catagtttttacatagagagtgaagaggaggaagatgaagagaaagtattcaacggtgaa
gcagttgatggaaatgaatcggatgcttcagattcttcggctgaaaatcagcagcaaatt
aagcccgactcgtacaatactccgtggcctcaaagttacaggcagtccattgatttatac
agcagtgtaccctcgccgaacatcgggttcttgggcactccgacgctttcaagattaagc
agttcatatctttcatcgtcgttaaccagacgacacactccggaatcgttatctgcggcg
acgaagccattgttgccgaatgttgatgatcaaatacagcctcatggacgaagctctcac
actttgctgcctccgatcccgtcgaggagacattcctcaagatttgacggtaaaacatcc
aaagtctcgcatgaaattccactccctcgacagtgctcttacggtcaagccgttctcaat
gggattaatgtgctatgtggagtggggatcctatcaaccccatatgcagcaaaagaagga
ggatggttggggcttataatattattcacatttgctctgctctcattttacactggcctg
ctgttgcgccaatgccttgacagccaacctggcctcgaaacttaccccgatatcggccaa
gcttctttcggcacctccggtagaatcgccctctctataattttatacgttgagctatat
gcttgctgtgttgagtatataattttagagggtgataacttggcatcattattcccaaat
gcatatattagttggggtggattcgagttaagcccgcaacgtctgtttgctttggtgacg
acccttgctgttcttcccaccgtttggctcagagacctcagtgttcttagttatatttct
gctggtggagtggtggcatcaatcatggtagtactctgcttgttttgggttggtttggtt
gacaaagttgggttccataacaaagggacacccttaaacattgctactcttcctgttgct
gttgggctctatggttactgttattcaggacatgctgttttccccaacatctattcttca
atggcaaagcctaatcaattcccttccgttcttcttgcctgctttgcaatctgttcattg
ttgtatgctggaactgcagttatgggttacacaatgtttggagaagcgacggaatcacag
tttactcttaatatgcctaaagatctcattgcttcaaagattgcagtgtggacaacagta
gtcaaccccttcaccaagtatgcattgacaatgtcaccggtggcaatgagtcttgaagag
ttgattccatcaagccatcttaagtctcacatctatgccatcttgattagaacatcgctt
gtgatctccaccttgattgttggtctcaccatccccttctttggattggtcatgtcatta
ataggatctttgctcacaatgcttgtgaccttgatacttcctcctgcttgttatttaagc
atcttgaggggtaaagtaacccgttttcaggcaacactttgtattatggttattgcagtg
ggagtagtttcatcagtctttggaacatattcagcgctctctaaaattgttgagaatttg
agaagctaa
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