Hibiscus syriacus (Rose-of-Sharon): 120219529
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Entry
120219529 CDS
T09559
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120219529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120219529
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120219529
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120219529
Coactivators
SAGA/TFTC/STAGA complex
120219529
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
120219529
STAGA complex
120219529
TFTC complex
120219529
SAGA complex
120219529
SLIK complex
120219529
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
CBFD_NFYB_HMF
MMS19_C
Histone
Motif
Other DBs
NCBI-GeneID:
120219529
NCBI-ProteinID:
XP_039072276
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MSNVPKEAIEVIAQSIGITNLSPDVAIALAPDVEYRVREIMQEAIKCMRHSRRTVLAADD
VESALNLRNVEPIYGFTSRDALRFKRAAGHKDLFYIDDKDVEFKEVIESSLAKAPIDTSV
TSHWLAIEGIQPEIPENASVEAPSDGKKAEYKEDGTSADVKLPVKHVLSRELQLYFDKIM
EITMNRSLSILFKQAILNLSTDSGLHPLVPYFTYFIADEVARNSNNFLILSALMRVTRSL
HQNDHIHIEPYLHQLMPSIITCLIAKRLGNKFTDNHWELRNFAAKLVASICKRFGHVYHN
LQPRVTRTLLHVFLDPTKTFPQHYGAIQGLAALGPSVVRLLILPNLEAYLQLLEPEMALE
KQKNEIKRHEAHCVYGALLRAAGLCMYDRLKMFPGLLASPTRPAWKNSVKVTRTNKRKAS
TDNLMQQPPVKKIATESAVGMMPINSMQADLQGAACSFSNSVGGSNIGASSMSRPLSNDN
MLGREAGSRVSKTSTVLAQAWKEDTDAGNLLASLFELFGESMLSFTPKPELSIFL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgttccaaaagaagccattgaagtgatagcgcagagtattggcattacgaat
ttatccccagatgttgccattgctttggctcctgatgttgaatatcgtgttcgagaaatc
atgcaggaggcaattaaatgcatgcgccactcacggcggacggttttggcagctgatgac
gttgaaagtgctcttaatctgcgaaatgtggagccgatatatggctttacttcccgtgat
gcactacgattcaaaagagctgctgggcataaggatttgttctatattgatgacaaggat
gtggagtttaaagaagttattgaatcgtctttggcaaaagcaccaattgatacatctgtc
acatctcactggcttgcaattgaaggcattcaaccggaaattccggagaatgcttcagtt
gaagcaccttctgatggcaaaaaggctgaatacaaagaggatggaacttctgctgatgtt
aaattacctgttaagcatgtattatcgagagaacttcaactttactttgacaagatcatg
gagattaccatgaatagatctctctcaattctctttaaacaagcaatactaaacttgtca
actgactcgggactacatcccttagttccctattttacatatttcattgctgatgaggtt
gcacggaattcaaataatttccttattttgtctgctttgatgcgtgtcacccggagcctt
caccagaacgatcacatacatatagaaccttacttacaccaattgatgccatctattatt
acctgcctcattgcaaaaagattagggaataaattcactgacaatcactgggaacttaga
aactttgcagcaaagctagtggcatcaatatgcaaaagatttgggcatgtttatcacaat
cttcagccacgtgtgacaaggactctgctccatgtttttttggacccaaccaaaacattt
ccccagcattatggtgcaattcaagggttagcagcccttggacccagtgtggttcgtcta
cttatactgccaaatcttgaagcatatttgcagcttcttgaacctgaaatggcactggaa
aagcagaagaatgaaataaaaagacacgaagctcattgtgtttatggggctctgctgcgt
gcagctgggctgtgcatgtatgatcggcttaaaatgttccccggtctgctagcctctcca
actcgtcctgcctggaaaaacagcgtgaaagtcacaaggacaaataaacgaaaggcaagc
acggacaacttgatgcagcaaccaccggtcaagaaaatagcaaccgagagtgcagtggga
atgatgcctataaattccatgcaagctgatttacaaggggcagcttgcagcttttctaac
tccgtaggaggttcgaatattggcgcttcatcaatgtctcggccattatcaaatgataac
atgctaggaagggaggctggcagtcgagtttcaaagacatcaactgttctagctcaggct
tggaaggaagatacagatgcagggaacttgttggcatcattatttgaactttttggtgaa
agtatgttatcatttaccccgaaacctgagctttcaatcttcctttga
DBGET
integrated database retrieval system
