Herbaspirillum seropedicae Z67: ACP92_00175
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Entry
ACP92_00175 CDS
T04519
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
hsz
Herbaspirillum seropedicae Z67
Pathway
hsz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACP92_00175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsz03021
]
ACP92_00175
Transcription machinery [BR:
hsz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACP92_00175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
PhyR_sigma-like
HTH_24
HTH_31
GerE
At4g18257_C
HTH_3
HTH_IclR
HTH_Crp_2
Xre-like-HTH
DUF2089
DUF977
HTH_Tnp_ISL3
HTH_17
HTH_40
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AKN63785
LinkDB
All DBs
Position
complement(47614..48120)
Genome browser
AA seq
168 aa
AA seq
DB search
MPVPMSIEALYCDHHSWLKGWLQRRLGNSEQAADLAQDTFLRLLGSERVPSVIHEPRAYL
TTVAQRLVSNLWRREKLEQAYLEALAQAPVALAPSPQEQAILLETLLELDQLLDELPSIV
RRAFLLSQLDGLTHAQVAAALGISIPTVKRYLVKALQRCYFADISFSA
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgccggttcccatgtctatcgaagccctctattgcgaccaccattcctggctcaaggga
tggctgcaacgtcgtctcggcaatagcgagcaggcggcggacctggcccaggacaccttc
ctgcggctgctgggcagcgagcgtgtgcccagcgtgatccacgagccgcgcgcctacctg
accacggtggcgcaacggctggtatcgaacctgtggcgccgcgagaaactggagcaggcc
tacctggaggcgctggcgcaggccccggtggcgctggcgccctcgccgcaggagcaggcc
atcctgctggaaaccctgctggagctggaccagctgctcgacgagctgccttccatcgtg
cgccgcgctttcctgctctcgcagctcgacggcctgacccacgcccaggtcgcagccgcc
ctgggcatttccattccgacggtgaaacgctacctggtcaaggccttgcagcgctgctat
ttcgccgacatctccttcagcgcctga
DBGET
integrated database retrieval system