KEGG   Herbaspirillum seropedicae Z67: ACP92_00950
Entry
ACP92_00950       CDS       T04519                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
hsz  Herbaspirillum seropedicae Z67
Pathway
hsz00300  Lysine biosynthesis
hsz00470  D-Amino acid metabolism
hsz01100  Metabolic pathways
hsz01110  Biosynthesis of secondary metabolites
hsz01120  Microbial metabolism in diverse environments
hsz01230  Biosynthesis of amino acids
Module
hsz_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:hsz00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    ACP92_00950
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    ACP92_00950
Enzymes [BR:hsz01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     ACP92_00950
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AKN63925
LinkDB
Position
201430..202722
AA seq 430 aa
MSHFSYRNGVLHAEQVSLATLAEQFGTPLYVYSKAALVENFSAYANACQQAGRADGGKGG
ALVCYSVKSNSNLAVLNLLGRLGSGFDIVSGGELLRVVAAGGDARKVIFSGVGKGRDEMK
LALEHDILCFNVESIPEVARLNEVAGALGKRARISLRVNPNVDAKTHPYISTGLKENKFG
VAYEDALNCYRAAAALPHIEVVGIDCHIGSQLLDDSPLLEALDKIIDMVDALEAEGIPIH
HLDIGGGIGIRYDDEQPVAIGDYLARVFARVDAWRASKYQGRPIQVMFEPGRSVVGNAGL
LLTEVQYLKHGEGKNFAVVDAAMNDLMRPAMYEAWHGVKTVKENAGQPRIYDVVGPVCES
GDWLARSRELAIGEGDLLALMSAGAYGMTMASNYNTRGRAAEVLVDGERAHLIRARENPA
DLFALEKIVS
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgtctcatttctcctatcgcaacggcgtcctgcacgccgaacaggtttccctcgctacc
ctggccgagcagttcggcacgcccctgtacgtctattccaaggccgccctggtcgagaat
ttctccgcctacgccaatgcctgccagcaggcggggcgtgcagacgggggcaagggcggg
gcgctggtgtgctactcggtcaagtccaattccaacctggcggtgctgaacctgctgggc
cgactgggttcgggcttcgatatcgtctccggcggtgaactgctgcgcgtggtggcggcg
ggcggcgatgcccgcaaggtgatcttctcgggcgtgggcaagggccgcgacgagatgaag
ctggccctggaacatgacatcctctgcttcaacgtcgaatccatccccgaggtggcccgt
ctgaacgaagtggccggtgcgctgggcaagcgcgcccgcatctcgctgcgcgtgaacccc
aatgtggacgccaagacccacccctacatctccaccggcctgaaggaaaacaagttcggc
gtggcctatgaggatgcgctgaactgctaccgcgccgccgccgcccttccccacatcgaa
gtggtcggcatcgattgccacatcggctcgcagttgctggacgactcgccgctgctggaa
gcgctggacaagatcatcgacatggtcgatgcgctggaagccgagggcatccccatccat
cacctcgacatcggcggcggcatcggcatccgctacgacgacgagcagccggtggccatc
ggcgactacctggcgcgcgtgtttgcccgtgtcgacgcctggcgcgccagcaagtaccag
ggccgtcccatccaggtcatgttcgagccgggccgctcggtggtcggcaatgccggcctg
ctgctgaccgaagtgcaatacctcaagcatggcgaaggcaagaacttcgccgtggtcgac
gccgccatgaacgacctgatgcgcccggccatgtacgaagcctggcacggcgtgaagacc
gtcaaggaaaacgccggccagccgcgcatctatgacgtggtcggtccggtctgcgaatcg
ggtgactggctggcgcgctcgcgcgagcttgccatcggcgaaggcgacctgctggccctg
atgtcggcgggcgcctacggcatgaccatggcgtccaattacaacacccgcggccgcgcg
gccgaggtactggtcgatggcgaacgcgcccacctcatccgtgcgcgtgaaaacccggcc
gacctgtttgcgctggagaagatcgtcagctga

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