Herbaspirillum seropedicae Z67: ACP92_02090
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Entry
ACP92_02090 CDS
T04519
Name
(GenBank) ATP-dependent DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
hsz
Herbaspirillum seropedicae Z67
Pathway
hsz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACP92_02090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsz03400
]
ACP92_02090
DNA repair and recombination proteins [BR:
hsz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACP92_02090
RecFOR pathway proteins
ACP92_02090
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
HHH_8
IMS_HHH
Transposase_20
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AKN64129
LinkDB
All DBs
Position
455530..456108
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AA seq
192 aa
AA seq
DB search
MIGRLSGILLEKLPPNLLVDCQGVGYEVAVPMSTYYNLPALGEKVTLLTHLAIREDAHIL
FGFGTAEERNTFKELIKISGVGARTALSILSGMSVADLAQAVTLQEAGRLTRVPGIGKKT
AERLLLELKGKLGADLGAVAGVVHSDASADILNALLALGYSDKEATLAMKQVPKDSTVSD
GIKLALKALSKG
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgatcggtcgcctctccggaattcttctcgaaaaacttccccccaacctgctggtggac
tgccagggcgtcggctatgaagtggccgtgcccatgagcacctactacaacctgccggcc
ctgggcgagaaggtcacgttgctgacgcacctggccatccgcgaggatgcgcacatcctg
ttcgggtttgggactgccgaagagcgcaatacgttcaaggagctgatcaagatttcgggc
gtgggcgcgcgtaccgcgctgtccatcctctcgggcatgtcggtggccgacctggcccag
gccgtcaccctgcaggaagccggtcgcctcacccgtgtgcccggcatcggcaagaagacc
gccgaacgcctgctgctggagttgaagggcaagctcggcgccgatctgggcgcggtggcc
ggcgtggtccacagcgacgccagcgccgacattctcaacgccctgctggcgctgggctat
tcggacaaggaagcgaccctggccatgaagcaggtgcccaaggacagtaccgtctcggac
ggcatcaagctggccctgaaggcgctttccaagggctga
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