Herbaspirillum seropedicae Z67: ACP92_02120
Help
Entry
ACP92_02120 CDS
T04519
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
hsz
Herbaspirillum seropedicae Z67
Pathway
hsz00730
Thiamine metabolism
hsz01100
Metabolic pathways
hsz01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hsz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
ACP92_02120
Enzymes [BR:
hsz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
ACP92_02120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AKN64135
LinkDB
All DBs
Position
462762..464675
Genome browser
AA seq
637 aa
AA seq
DB search
MNANPKFLSATATVDEAAIQPLPNSRKIYVTGSRPDIRVPMREISQADTPAMFGSEKNPP
IYVYDTSGPYTDPEVKIDIRAGLSTPRLPWILERDDTEELPGPTSEYGQQRLNDPALAEL
RFNLHRKPRRAKAGANVTQMHYARRGIITPEMEFIAIRENLRRKEYLEQLKASGPMGNKL
ADLMGRQHPGQSFGASIPAEITPEFVRDEVARGRAIIPANINHPEVEPMIIGRNFLVKIN
ANIGNSAVTSSIGEEVEKMTWAIRWGGDNVMDLSTGKNIHETREWIIRNSPVPIGTVPIY
QALEKVNGKAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVRLQYVPLTAKRMTGIVSRGGS
IMAKWCLAHHRESFLYEHFEEICEIMKAYDVSFSLGDGLRPGSIYDANDEAQLGELRTLG
ELTQIAWKHDVQVMIEGPGHVPMHLIKENMDLQLEQCHEAPFYTLGPLTTDIAPGYDHIT
SGIGAAQIGWYGTAMLCYVTPKEHLGLPNKTDVKDGIITYKIAAHAADLAKGHPGAQIRD
NALSKARFEFRWEDQFNIGLDPDKAREFHDETLPKDSAKVAHFCSMCGPHFCSMKITQEV
RDYAAKEGISEIDALKQGMQVKSVEFVKMGAEIYSKQ
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccaacccgaaattcctgtccgcgacggccaccgtcgatgaggcagccatccag
cccctgccgaattcccgcaagatctacgtgaccggctcgcgcccggacatccgcgtgccc
atgcgcgagatcagccaggccgacacgccggccatgttcggttcggaaaagaacccgccc
atctacgtctatgacacctccggcccctataccgacccggaggtgaagatcgacatccgc
gccggcctgtccaccccgcgcctgccctggatcctcgagcgcgacgataccgaggagctg
cccggcccgacttcagaatacggccagcagcgcctgaacgacccggccctggccgagctg
cgcttcaacctgcaccgcaagccgcgccgcgccaaggcgggcgccaacgtcacccagatg
cactacgcgcgccgtgggatcatcacgcccgagatggagttcatcgccatccgcgaaaac
ctgcgtcgcaaggaatatctggagcagctgaaggcttccggcccgatgggcaacaagctg
gccgacctgatgggccgtcagcatcccggccagtccttcggcgcttccatccccgccgag
atcacgccggaattcgtgcgtgatgaggtggcgcgcggccgcgccatcatccccgccaac
atcaaccatccggaagtggaaccgatgatcatcggccgcaatttcctggtcaagatcaac
gccaacatcggcaactcggcggtgacctcttccatcggcgaggaagtggaaaagatgacc
tgggccatccgctggggcggcgacaacgtcatggacctgtccaccggcaagaacatccac
gaaacccgtgagtggatcatccgcaattcgccggtgcccatcggcaccgtgccgatctac
caggccctggaaaaggtcaacggcaaggccgaagacctgacctgggaaatcttccgcgat
accctgatcgagcaagccgagcagggcgtggactacttcaccatccacgctggcgtgcgt
ctgcaatacgtgccgctgacggccaagcgcatgaccggcatcgtctcgcgtggcggttcc
atcatggccaagtggtgcctggcgcatcaccgcgaatccttcctctacgaacacttcgaa
gagatctgcgagatcatgaaggcctatgacgtcagcttcagcctgggcgatggcctgcgt
cccggttcgatctacgacgccaacgacgaagcccagctgggcgaactgcgcaccctgggt
gaactgacccagatcgcctggaagcacgacgtgcaggtgatgatcgaaggccccggccac
gtgcctatgcatctcatcaaggagaacatggacctgcaactggagcagtgccacgaagca
ccgttctacaccctcggccccttgaccaccgacatcgcgcccggctatgaccacatcacc
tccggcatcggcgcggcccagatcggctggtatggcacggccatgctgtgctacgtcacg
cccaaggaacacctgggcctgcccaacaagaccgatgtgaaggacggcatcatcacctac
aagatcgccgcgcacgccgccgacctggccaagggccatccgggtgcgcagatccgcgac
aacgcgctgtccaaggcgcgcttcgaattccgttgggaagaccagttcaacatcggtctc
gatcccgacaaggcgcgcgaattccacgacgaaaccctgcccaaggattcggccaaggtg
gcgcacttctgctccatgtgcggcccgcacttctgttccatgaagatcacccaggaagtg
cgcgattacgccgccaaggaaggcatctccgagatcgatgcattgaagcaggggatgcag
gtcaagtcggtggagttcgtcaagatgggcgccgagatttattcgaagcagtaa
DBGET
integrated database retrieval system
