Herbaspirillum seropedicae Z67: ACP92_03145
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Entry
ACP92_03145 CDS
T04519
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hsz
Herbaspirillum seropedicae Z67
Pathway
hsz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACP92_03145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsz03019
]
ACP92_03145
Enzymes [BR:
hsz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
ACP92_03145
Messenger RNA biogenesis [BR:
hsz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ACP92_03145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
AKN64315
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All DBs
Position
complement(688014..689618)
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AA seq
534 aa
AA seq
DB search
MIKKLIRSILGRGKTAAAAASAEPPAPARKTRAKAGADGKIEPDVLGPKEHGIDPSLVSP
NAVRVTQTLQEAGYKAFIVGGAVRDLLLGIKPKDFDVATNATPEQVKQLFRRAFIIGRRF
QIVHVMFGQELIEVTTFRGASAEAAPKDEHGRVLRDNTFGEQHEDATRRDFTINAMYYDP
ASQAVLDYHGGIADIRDKKLRIIGEPEARYREDPVRMLRVVRFAAKLKFTIDPASSAPIR
VMAPLIDNVPAARVFDEMLKLLMSGHALACLQQLRKEGLHHGLLPLLDVVLEQPLGEKFV
TLALADTDARVKQGKGVSPGFLFASLLWHQVLEKWRAYQAAGEYPIPALHLAADDVLDAQ
TEKLALQRKIASDMRDIWAMQPRFERRVGKAPYKLLEHLRLRAGFDFLLLRCQSGELDAE
LGEWWEAFIAGTGAEREELIARKPADAAGVAAGPKKRKRRGGRSRSRSGGDADFNDTAPA
GDVAPAPAEAPARAESAAPDSDSGASPAPKRRRRRRSSTGGAEGAGGDAGAGSD
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaaactgattcgctccatcctgggccggggcaagacggccgccgcagcagcc
agcgccgagccccccgcgccagccaggaagacccgcgccaaggccggcgcagacggcaag
atcgagcccgatgtgctgggccccaaggaacatggcatcgatcccagcctggtctcgcct
aatgccgtgcgggtcacgcaaaccctgcaggaagccggctacaaggccttcatcgtcggc
ggtgcggtgcgcgacctgctgctggggatcaagcccaaggacttcgacgtggccaccaac
gccacgccggaacaggtcaagcaactgttccgccgcgccttcatcatcggccgccgcttc
cagatcgtgcatgtgatgttcggccaggaactcatcgaggtcaccaccttccgcggcgcc
tccgccgaagccgcgcccaaggatgaacatggccgcgtgctgcgcgacaacaccttcggc
gagcagcatgaagacgccacccggcgcgacttcaccatcaacgcgatgtactacgatccg
gccagccaggccgtgctggactaccacggcggcatcgccgacatccgcgacaagaagctg
cgcatcatcggcgaacccgaggcgcgctaccgcgaagatccggtgcgcatgctgcgcgtg
gtgcgctttgccgccaagctcaagttcaccatcgacccggccagcagcgcgcccatccgc
gtgatggccccgctgatcgacaatgtgccggccgcgcgcgtgttcgatgagatgttgaag
ctgctcatgagcggccatgccctggcctgcctgcagcagctgcgcaaggaaggcctgcac
catggcctcctgccgctgctggacgtggtgctggaacagccgctgggcgagaagttcgtg
accctggcgctggccgataccgatgcccgtgtcaagcagggcaagggtgtctcgccgggc
ttcctgttcgcttcgctgctgtggcaccaggtactggaaaagtggcgcgcctaccaggcg
gccggcgaatatccgattcccgcactgcacctggcggccgatgatgtgctggacgcccag
accgaaaagctggccctgcagcgcaagatcgcctcggacatgcgtgacatctgggccatg
cagccgcgcttcgaacgccgcgtgggcaaggcgccctacaagctgctggaacacctgcgc
ctgcgcgccggcttcgatttcctgctgctgcgctgccagtccggcgaactcgatgccgag
ctgggcgaatggtgggaagccttcatcgccggcaccggcgcggaacgcgaagaactgatc
gcccgcaagcccgccgatgccgccggcgtggctgccggtcccaagaaacgcaagcgtcgt
ggcggacgcagccgcagccgtagcggcggcgacgctgacttcaatgacaccgcacccgcc
ggcgatgtcgcccctgcccctgcagaggccccggcccgtgcagaaagcgcagcgcccgac
tccgatagcggcgcgagcccagcgcccaagcgccgtcgtcgccgccgcagcagtaccggc
ggcgccgagggcgcaggcggtgatgcgggcgccggcagcgactga
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