Herbaspirillum seropedicae Z67: ACP92_05410
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Entry
ACP92_05410 CDS
T04519
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
hsz
Herbaspirillum seropedicae Z67
Pathway
hsz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hsz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACP92_05410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsz02000
]
ACP92_05410
Transporters [BR:
hsz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ACP92_05410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
YbgS
Motif
Other DBs
NCBI-ProteinID:
AKN64708
LinkDB
All DBs
Position
complement(1193706..1194749)
Genome browser
AA seq
347 aa
AA seq
DB search
MKRLTPALLSPLALGLLFSGAACAAELTVVNFGGANGNAQKVAYVEPFQKSTGTKVVTAE
FNGELAKVKAMVETKKVSWDVVEIDGGDLNRACDDGLIEKLDLAKTIKKDDYIPEATVSE
CGMGAFVWSTVLAYNGDKLKTPPTGWADFWDTKKYPGKRGMKKSAQFNLEFALMADGVPT
KDVYKVLATKEGVDRAFKKLDQLKPNIQWWDAGALPAQFLASGDVVMANAYNGRIDAAQR
EGKNLKVVWAGSVYTLDYWVIPKGSPNKALGEKFISFASQPDTQKTYANNIAYGPVNKGA
LKLLDAKTLANLPTSPANAKDAVQLSLQFWTDHGEELEQRFAAWIAK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcctgacacccgccctgctgtccccgctcgccctgggcctgctgttttccggc
gcggcctgtgccgctgaactgaccgtggtcaattttggcggcgccaatggcaacgcccag
aaggtggcctacgtggagccgttccagaagagcaccggcaccaaggtcgtgaccgctgaa
ttcaacggtgaactggccaaggtcaaggccatggtcgagaccaagaaggtcagctgggac
gtggtggaaatcgacggcggcgacttgaaccgcgcctgtgacgacggcctgatcgaaaag
ctcgacctggccaagaccatcaagaaagacgactacatccccgaagccaccgtcagcgaa
tgcggcatgggcgccttcgtctggtccaccgtgctggcctacaacggcgacaagctcaag
accccgccgaccggctgggccgatttctgggataccaagaagtaccccggcaagcgtggc
atgaagaagagcgcccagttcaacctggagttcgccctgatggccgacggcgtgccgacc
aaggatgtctacaaggtcctggccaccaaggaaggcgtggaccgcgccttcaagaagctg
gaccagttgaagcccaacatccagtggtgggatgcaggcgcattgccggcgcagttcctg
gcctcgggtgacgtggtcatggccaatgcctacaacggccgcatcgacgccgcccagcgc
gaaggcaagaacctcaaggtcgtatgggccggcagcgtctatacgctggattactgggtg
atccccaagggttcgcccaacaaggccctgggcgagaagttcatcagcttcgccagccag
ccggacacccagaagacctacgccaacaacatcgcctacggccccgtcaacaagggcgcc
ttgaagctgctcgatgccaagactctggccaacctgccgacctcgccggccaatgccaag
gatgcggtgcaactgagcctgcagttctggaccgaccacggcgaagagctggagcaacgt
ttcgcggcctggatcgcgaagtaa
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