KEGG   Herbaspirillum seropedicae Z67: ACP92_06135
Entry
ACP92_06135       CDS       T04519                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
hsz  Herbaspirillum seropedicae Z67
Pathway
hsz00260  Glycine, serine and threonine metabolism
hsz00460  Cyanoamino acid metabolism
hsz00630  Glyoxylate and dicarboxylate metabolism
hsz00670  One carbon pool by folate
hsz00680  Methane metabolism
hsz01100  Metabolic pathways
hsz01110  Biosynthesis of secondary metabolites
hsz01120  Microbial metabolism in diverse environments
hsz01200  Carbon metabolism
hsz01230  Biosynthesis of amino acids
hsz01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:hsz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    ACP92_06135 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    ACP92_06135 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    ACP92_06135 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    ACP92_06135 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    ACP92_06135 (glyA)
Enzymes [BR:hsz01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     ACP92_06135 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Aminotran_5 Beta_elim_lyase Cys_Met_Meta_PP OKR_DC_1 Met_gamma_lyase
Other DBs
NCBI-ProteinID: AKN64843
UniProt: A0AA44EEK8
LinkDB
Position
1381246..1382490
AA seq 414 aa
MFDKNQTLAKVDPDLWSAIQKENARQQDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDVAEQLAIDRLKALFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGMS
LAEGGHLTHGMALNMSGKWFNVVSYGLNDKEEIDYEAMERLAREKKPKLIIAGASAYSLR
IDFERFAKIAKEVGAYFMVDMAHYAGLIAAGVYPNPVPFADFVTSTTHKSLRGPRGGVIL
MKAEHEKAINSAIFPGIQGGPLMHVIAAKAVAFKEAASPEFKAYQQQVVKNADVLAKTLI
KRGLRIVSGGTESHVMLVDLRPKGLTGKEAEAILGSAHMTCNKNGIPNDPEKPFVTSGIR
LGSPAMTTRGFKEAEAEKVGNFIADVLDNPHDAATIERVKAEVKKLTDAFPVYG
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgtttgacaagaaccagactctcgcgaaagtcgatcccgacctgtggtctgccatccag
aaggaaaacgcacgccagcaggatcacatcgagctgatcgcttctgaaaactacacctcg
ccggccgtcatggaagcgcaaggttcgcaactgaccaacaagtacgccgaaggctatccg
ggcaagcgctactacggcggctgcgaatacgtggacgtggccgagcaactggccatcgac
cgcttgaaggccctgttcggcgccgaagccgccaacgtgcagccgaactccggctcccag
gccaaccagggcgtgttcttcgccatgttgaagccgggcgacaccatcatgggcatgtcg
ctggcagaaggcggccacctgacccacggcatggcgctgaacatgtcgggcaagtggttc
aacgtggtttcctatggcctgaacgacaaggaagagatcgactacgaggccatggagcgc
ctggcccgtgagaagaagcccaagctgatcatcgctggcgcctcggcttactcgctgcgc
atcgacttcgagcgcttcgccaagatcgccaaggaagtcggcgcctacttcatggtcgac
atggcccactacgccggcctgatcgccgctggcgtctatccgaacccggtgcccttcgcc
gacttcgtcacctcgaccacccacaagtccctgcgcggcccgcgcggtggtgtgatcctg
atgaaggccgagcacgagaaggccatcaactcggccatcttcccgggtatccagggtggt
ccgctgatgcacgtcatcgcggccaaggccgtggccttcaaggaagcggcttcgccggaa
ttcaaggcctatcagcagcaagtggtgaagaacgccgacgtgctggccaagaccctgatc
aagcgcggcctgcgcatcgtctccggcggcaccgagtcgcacgtgatgctggtggatctg
cgcccgaagggcctgaccggcaaggaagccgaagccatcctgggttcggcccacatgacc
tgcaacaagaatggcatccccaacgatccggaaaagccgttcgtgacctcgggcatccgc
ctgggcagcccggccatgaccacccgtggtttcaaggaagccgaagccgagaaggtcggt
aacttcatcgccgacgtgctggacaacccgcatgacgcggccaccatcgaacgcgtcaag
gccgaggtgaagaagctgaccgacgctttcccggtctacggctga

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