Herbaspirillum seropedicae Z67: ACP92_09265
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Entry
ACP92_09265 CDS
T04519
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hsz
Herbaspirillum seropedicae Z67
Brite
KEGG Orthology (KO) [BR:
hsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsz03400
]
ACP92_09265
Enzymes [BR:
hsz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ACP92_09265
DNA repair and recombination proteins [BR:
hsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ACP92_09265
Prokaryotic type
ACP92_09265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AKN65404
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All DBs
Position
complement(2109123..2110607)
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AA seq
494 aa
AA seq
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MPQFDRSLVWFRRDLRMTDHAALYYALSQSRQVWCVFVFDTDILAALKAEGVTQDRRIDF
LLASVAELDEALRHAGGGLIVLHGSAVTQIPALAAELDVQAVYANTDYEPAAVERDAAVA
QTLAKSGAQLLSYKDQVIFEKDEVLTQSAKPFSVFTPYKNAWMSKLAAADGDFFLKPYPV
EKYLTALASPPGKAGHALPSHRQLGFAPSNLQELKIPTGMSGAQSLLDEFLDRIGSYGAA
RDFPAVKGPSYLSVHLRFGTISIRTLARAAMQAMHAGQGAAGAAVWLSELTWRDFYFMIL
HHHPRVTRHAFKPEYDAIQWEQGPQAEALFAAWCEGRTGYPLVDAAMAQINQSGYMHNRL
RMVVASFLTKDLGIDWRWGERYFARHLNDFDLAANNGGWQWASSSGCDAQPYFRIFNPVT
QSEKFDPDGKFIRRYLPQLAKLSNKRIHAPWTATPDERMDAGVVLGQNYPRPIVDHAQAR
ERTLARYAVVKKAE
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaattcgacagatccctggtctggttccgccgtgacctgcgcatgaccgaccac
gctgcgctctactacgcgctttcgcagagccggcaagtgtggtgcgtgttcgtcttcgac
accgacatcctcgctgccctcaaggccgagggcgtcacgcaggatcgccgcatcgatttc
ctgctggccagcgtggccgagctcgatgaagccctgcgccacgccggcggcggactgatc
gtgctgcacgggtcggccgtcacgcagatcccggcgctagccgccgagctggacgtgcaa
gcggtttatgccaacaccgactacgaacccgctgccgtggaacgcgacgcggcggtggcc
cagaccctggccaagagcggcgctcaattgctgagctacaaggaccaggtgatcttcgag
aaggacgaagtgctgacgcaatcggccaaacccttctctgtcttcacgccctacaagaat
gcctggatgagcaagctggccgcagccgacggcgacttcttcctcaagccctatccggtc
gagaagtacctcacggccctggcaagcccacccggcaaggcaggacacgccctgccctcg
cacaggcaactgggctttgcgcccagcaatctgcaggaactgaagattcccaccggcatg
tcgggcgcacaaagcctgctggacgaattcctcgaccgcatcggcagctatggcgcggcg
cgcgacttcccggcggtgaagggaccgtcctacctgtcggtgcatctgcgctttggcacc
atctccatccgcaccctggcgcgggcggccatgcaggccatgcatgccggacaaggagcg
gcgggcgcggcggtgtggctgtcggaactgacctggcgcgatttctatttcatgatcctg
caccaccacccccgcgtcacccgccacgccttcaagcccgaatacgacgccatccagtgg
gagcaaggcccgcaggccgaagcactctttgccgcctggtgcgagggccgcaccggctat
ccgctggtcgatgccgccatggcgcagatcaaccagagcggctacatgcacaaccgcctg
cgcatggtggtggccagcttcctgaccaaggacctgggcatcgactggcgctggggcgag
cgctactttgcgcgtcacctcaatgacttcgacctcgccgccaacaacggcggctggcag
tgggcctcctcctcgggctgcgatgcccagccctacttccgcatcttcaatccggtgacg
cagtcggagaaattcgatcccgacggcaagttcatccgccgctatctgccgcaactggcc
aagctctccaacaagcgcatccatgcgccgtggacggccacgccagatgaacgcatggat
gccggcgtggtgctgggacagaactatccccgccccatcgtcgatcacgcccaggcgcgc
gagcgcacgctggcgcgctatgcggtcgtgaagaaagccgagtaa
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