Herbaspirillum seropedicae Z67: ACP92_09645
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Entry
ACP92_09645 CDS
T04519
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
hsz
Herbaspirillum seropedicae Z67
Pathway
hsz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hsz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ACP92_09645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsz03019
]
ACP92_09645
03009 Ribosome biogenesis [BR:
hsz03009
]
ACP92_09645
03036 Chromosome and associated proteins [BR:
hsz03036
]
ACP92_09645
Enzymes [BR:
hsz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
ACP92_09645
Messenger RNA biogenesis [BR:
hsz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACP92_09645
Ribosome biogenesis [BR:
hsz03009
]
Eukaryotic type
90S particles
RNase
ACP92_09645
Prokaryotic type
rRNA processing factors
ACP92_09645
Chromosome and associated proteins [BR:
hsz03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
ACP92_09645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AKN65477
LinkDB
All DBs
Position
2192808..2193767
Genome browser
AA seq
319 aa
AA seq
DB search
MDPQLLQQRLGHTFKDASLLQQALTHRSHSALHNERLEFLGDSVLNCVVASLLFERYDKI
DEGDLSRLRANLVKQQSLYEIAQRLELSQFLRLGEGELKSGGFRRPSILADTLEALFGAI
FLDSGFEAARAVIRSLYVPVLEHVDPRTLGKDAKTLLQEFLQGKKIPLPQYNVIATHGAA
HSQEFEIECLVPKLDIQVFGTGGSRRAGEQAAAKLALEAVQLALAKTPSAGRKPRTRTTQ
LKLAGIATIQPDAPEHESGKGNRPDAVQTSAGKPAKPAKEQKSAPAAARSEAKNTGDRPE
TAAAEPISAASSATQSRTA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggatcctcaactcttgcaacaacggctaggccacactttcaaggatgcttcgctcttg
cagcaggccttgacccaccgtagccatagcgccttgcataacgagcggctggaattcctc
ggcgattcggtgctgaactgtgtggtggcctcgctgctcttcgaacgttacgacaagatc
gacgagggtgacctctcgcgtctgcgcgccaacctggtcaagcagcaatcgctgtacgag
atcgcccagcggctggagttgtcgcagttcctgcgcctgggcgagggcgagctcaagtcg
ggcggtttccgccgtccctccatcctggccgataccctggaggcgctctttggcgccatc
ttcctcgattccggcttcgaggccgcgcgcgcggtgatccgctcgctctacgtgcccgtg
ctggaacacgtcgatccgcgcaccctgggcaaggacgccaagacgctcctgcaggaattc
ctgcaaggcaagaagatcccgctgccgcagtacaacgtcatcgccacccacggcgctgcc
cacagccaggaattcgagatcgagtgcctggtgcccaagctggacatccaggtcttcggc
accggcggcagccgccgcgccggcgagcaggccgctgccaagctggcgttggaggctgtg
caactggccctggccaagacgccctcggccggccgcaagccgcgtacccgtaccacccag
ttgaagctggccggcattgccaccatccagccggatgcgccggagcacgaaagcggcaag
ggcaaccgcccggacgccgtccagaccagcgccggcaagccggccaagcctgccaaggag
cagaagagcgcccccgcagccgcccgcagtgaggccaagaacaccggcgaccgccctgaa
acggccgcagcagaacccatttcggcggcttcatccgccacgcaatccagaacagcatga
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