Herbaspirillum seropedicae Z67: ACP92_15265
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Entry
ACP92_15265 CDS
T04519
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
hsz
Herbaspirillum seropedicae Z67
Pathway
hsz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hsz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACP92_15265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_12
YbbR
Dockerin_1
Motif
Other DBs
NCBI-ProteinID:
AKN66460
LinkDB
All DBs
Position
complement(3488362..3497841)
Genome browser
AA seq
3159 aa
AA seq
DB search
MDGKERVDEGQGERVQPADEVMSQEQSLASAEAAMSARHVSEEEADVPRADGEDSSERMQ
LAQADSDSSSNAAAVPAARSNASDAPSSVGEELLRQAAPVPRSREISFLDQLDDWLESDM
ALPVGLGAAALGFLALSGGGGGGSSGAAAAEAPPPAVEPPRNEWLMTVTPAAGVFLPNAT
VKLIAKKLMADGSWQEVANSTAVDASGRMTLKVAKGSLTAKDVIRLELSDTDPAGKDYKD
EVAGAQTLGGLKLEAYVGAWNADMAVTINPFTTMVVHKLDEAANAANAGGARGNSAVVND
AGAPGSAPGAGGAGAPGNAPVAGGAGAPVNAPVAGDAGAPVNAPAAGGAGAPVNAAAANA
PTTPAYGADAAKFEAAIAKAFGIQSGDLLHTIPILLNGRPVAGASADAINYGLALGILSG
MTQAQREAGAANPLQAALDLLKSAIQVNGGNVTFALETLRKSLITGSNIDGGLDAGAAKL
HAAAVEDGNNSTSTIKGAQVPYLQVDTTQEKPYAGQTKPVWADAAVSFSSFTNGGLSLKV
APAASAKVGDQLLVEFLPLDTTNGRLQGGGAKPFTFKYTYTEKDAEAVRLSAGDSSNNGI
GSFTLVVPTFDESAQFSATRTSVLRTATASSTPGSAPSLLDVNNDGVYRINNSEYGYQLR
ASGAVMGAFASGATLNISTQSIGVEAAPNATGGVLFNGSGVPGASNTVRFSVAIGQKINW
SGADPTLEVRVANHPTPLEATLVSGRNADVLTFKLDLTKPANKNLEGALSVAAHALKFSP
DTILSDVPGNTLFKTQDGRSWIDSKGSAVADIDAALNVNTALPNSGFSIDTTPPPTPRLT
LPGRPAFDANNYAPDNAKPVSGSLNAAPAGAKFGEHAVVTNEPRIPFKVSFDAADNAQLK
QGDRVKLVVDFPGTQGREIASASLSKDTGGNWTATFDPASYSENIQQLITRFKTTTDLDK
VTFSAVVVDQAGNQSVPGSLKNFAEGGVDNIWIDLKAPAKPSLVALNRASDTGRDDAPDT
RADGITSMAKPTLQIEGGEPGGFARVYANADGTGLLGEGRISNGQSLTGGSVNSASVALT
GGTGLVNGANTVYVQLIDAAGNKSEIQSKQIEVLLPLPMDARADIALTSTAPHNGFYVTG
DVIEVQVTFDREVYLKQGKVTDQLYVNLIQDGTGANAAKILKATYQSGLGKGTTDPGSKV
LTFKYTVGAGDDAPAGVKYKVGDLINVGHVLEDKAGSDVPGMSKPYTGAGLTIDTVAPPV
PALTLDADLLSHEARATAEVAKGQPLKVRGSEVGSKLAIKLTNASGVVENLDPLTATGAG
QTINLTDVQIAKLGDGLITVTAMASDTAGNVRAAAETKFTLDTTAPAVSASVTATGGGQP
PAVTKEQISFVVTFNEKLRVPVTIDNFTATNGTVNKVEAVTGAGNTNANSYTVLVTPNPD
MPAGNKVELKLKANGATPVLDVAGNPAELGAVIASQAIDTRGPTVISVPADNAPPAPPTM
NKDIVFNVRFDEMGSVSQMGNIGVGNFKAINGKVTKVEPVGASRTEYNVTVKPNAELTGN
SNEVQLNFFAVADIRMGQGSAGVADSLGNAARDQPNIARQIIDVQQPSITADGVSVSSRS
LASGNPDKPGYVHAGDTVRLAVVFDEAVTVSGTPKLNLQVGANTRSASYKTLSTDGKTAY
FDYVLTAADTATDGISIPANALQLPTGARITDLAGNAAKVDSSVVALNPAYKVDNSAPTL
TEVKVSEMTADNGSGIYKAGSVITVQAKFSEPVDINTTGGAPRIKLTIGGDERTAAYVDR
VPGDAPDVLKFSYTVLSGDNAPAGVAIPASPLVLNGASITDVSGNRAVLTLGGVQPNASF
KIDTTAPTVTAVAIESASVSGTEGNYRAGDVITAVVTFSEEVKLAPNAQASLNLMVGGDS
RTATLVTPTANAASNTLRFSYTLQSADADSNGISIAPNSLALAGVTDKAGNAAAPAHVAV
ADNPLFKVDNAAPTILSFSTTTPDGTYNIGKVINLRATASEELRPGAKITVTLDNGDTAV
LTRDASNRTLLEGSYTVVGGKPSTNDLTVTSFTQAAKDLAGNDLLTTMPAAGKNLGDNRA
IVLDAMMPPQPTMFRLDAASDGGASPNDGLISEVLPTFHFDGLVRGATVTVTGTFKGVTQ
TLLQFTASATAQDQKLTTPLTDGVYTDISVIQTSPSGNASQPRLLGNVTTPGSLELSTAA
PGVASQLVFDIDQDLQTEASLETGAPANAPRDFITLIRTPKFNFQGGNDGEVAVLFRDTN
GNNMVDAGEQVLGRQIIGVTNATNYRLQPGTSGNGLNGHYVEVAAENALGNGPYTDIKLA
LQSKYGTYGTAVPMARGATSGSGAGGITVINNKPVPDITGVTTNATAGESSAATMSFNVR
GGQTGARIIIKADRLDDNGTLIAAQQEIGRGVPDGNGVLTLQVGQFNGSYGNFKATQDYA
GRISNVAVTTVTNTGPQPLGTITWDHLPISVTASTDLAANSRPGTPFTVKFDFSKAPNGF
AQDDIAVTGSGVLSAFAPVLGSNNKRYSATFTPTDATVTRATFQVKDGSYTEPNNQSGAA
SNKLELVFNRAGAVAVSGASADGKPQLGDTLTATVSDPDGVKSDVPVAYVWKAGGVAIVG
ATGASLRLTDAQMGKAISVEARYTDNLGLAEVSSSASTPNVTGPNAPGVLKFTVNGQETS
VVRLGDNVTAVLSDGDGFDPARVTYSWRGERLARPLKGADNATGSTFQIAQDEDVHSFGT
TQILVQAEYTDLHGTSERVSGYAYLKYPQRPGTVVFDALNPPNTPYRSGDELHAIVKDDN
GTGNGGVTYTWYANDTVIPGQTGSHLQLIDAYRGKAIKVSVSYTDGEGLLETPTSQAIRV
EQPNNNAPVGAVTLAGSGELGTTVTASNTITDADGMPGQITYKWFASGDAATKGDLITAP
VFVNNDSSKLLITSDLVGKSLKAEANYTDGQGTDEKVLAATAKTAGWMTSVTLGNLSYAQ
FEAQPQVVSGAKLISRHPTSNVFILDVNGDGQITAADATTYITSLDANGSISFTTEAGRG
KATLLAANSPLWATLLPQPAEWGPANGVFGLPARNGQPAVTGGDFWTSTAGTAADSHQVW
SKSGAADGTPGAYEQSNASYMNDPNRLHFNVFQVSVLPA
NT seq
9480 nt
NT seq
+upstream
nt +downstream
nt
gtggacggcaaggagcgggttgacgaagggcagggcgaacgggtgcagccggccgacgag
gtgatgtcccaggagcagtccctggccagcgccgaagccgccatgtcggcgcgccacgtc
agcgaggaagaggccgatgtacctcgagccgacggcgaggactcctccgagcgaatgcaa
ctggcccaggccgacagcgattccagttccaacgccgccgccgtcccggcagccaggtcc
aacgccagcgacgcccccagcagcgtgggcgaggaactgctgcgccaggccgccccggtg
ccgcgtagccgtgagatttccttcctcgaccagctcgacgactggctggagagcgacatg
gccttgcccgtcggtctgggcgcggcagcgctgggctttctggcgctgtccggcggcggt
ggcggcggcagttccggcgcagctgctgcggaagcgccacctcccgccgtggaacctccg
cgcaatgaatggctgatgaccgtcacgcctgctgccggcgtcttcctacccaatgcaacg
gtcaagctgatcgccaagaagctcatggctgacggcagctggcaggaagtggccaatagc
accgcggtcgacgccagtggccgcatgacgctcaaggtcgccaaaggcagcttgactgcc
aaggatgtcatccgactggaactgagcgataccgaccccgccggcaaggactacaaggac
gaggtggcgggagcgcaaaccttgggcggtctcaagctggaagcctatgtgggcgcatgg
aacgccgacatggccgtcaccatcaacccgttcactaccatggtcgtgcacaagctggat
gaggcggctaatgcggctaatgcagggggcgctcgtgggaatagtgctgttgtgaatgac
gcgggtgctccgggcagtgctcctggtgcgggtggcgcgggtgctccgggcaatgctcct
gttgcgggtggcgcgggtgctccggtcaatgctcctgttgcgggtgacgcgggtgctccg
gtcaatgctcctgctgcgggtggcgctggcgctccggtcaatgccgccgctgccaatgcc
ccgaccaccccggcctacggcgccgacgccgccaagttcgaggcggcgatcgccaaggcc
ttcggcatccagtctggcgacctgctccataccattcccatcctgctcaatggcaggccc
gttgccggcgcctccgccgatgcgatcaattacggtctggcgctgggcatcctctccggc
atgacccaggcccagcgtgaggctggcgccgccaacccgctgcaggccgccctggatctg
ttgaagtcggccattcaggtcaatggcggcaatgtcacgttcgcgctggagactctccgc
aagtccctcatcaccggtagcaacatcgatggcggcctggatgccggtgcggccaagctg
cacgcagcggcggtggaggacggcaacaacagcaccagcaccatcaagggggcccaggtt
ccctacctgcaagtcgatacgacgcaagagaagccctacgccggccagaccaagcctgtc
tgggccgacgctgctgtcagtttttccagcttcaccaacggtggcttgagcctgaaggtg
gctccggccgcgtcggccaaggtcggtgatcagttgctggtggaatttcttccgctggac
accaccaatggccggctgcaaggcggcggggcaaagccgtttacgttcaagtacacctac
accgagaaggatgccgaagccgttcgcctcagcgcgggcgattccagcaacaacggcatc
ggcagcttcacgttggtggtgcctaccttcgatgagtccgcccaattcagtgccaccagg
accagcgtcttgcgtactgctacggcgtcctccacccccggttcggcgccctcgttgctc
gatgttaataacgacggcgtctatagaatcaacaacagtgagtacggctatcagttgcgc
gcttccggtgcggtgatgggggctttcgccagtggcgcgaccctcaacatcagcactcag
tccatcggagtggaagccgcccccaacgccaccggcggcgtactgttcaatggctccgga
gttcccggtgccagtaacaccgtccggttcagcgtcgccatcgggcagaagatcaactgg
agcggcgccgatcccacgctggaggtgagggtggccaatcaccctacgccactggaggcc
accttggtgtcgggtcgtaatgcagatgtattgacattcaagctggatctgaccaagccc
gcaaacaagaatctggaaggcgcattgagcgtggccgcacatgcgcttaaattctctccg
gacactatcttgagtgatgttcccggcaataccttgttcaagactcaggatggcaggagc
tggattgatagcaaggggagcgctgtcgcggatatcgacgcggccctgaacgtcaataca
gcacttcccaacagcggattctccattgacacgacgccgccgcccacacctcgcctgacc
ttgccaggtcgtccggcgttcgacgctaacaactatgcccctgacaatgccaagcccgtg
agcggcagtcttaacgccgccccggcgggcgcaaagtttggtgaacacgcggtagtgacc
aacgagccacggattcccttcaaggtgagtttcgacgcggcagataacgctcaactgaag
cagggggacagggtcaagctggtggtcgatttcccaggtactcaaggccgtgaaattgca
tcagcctcgctgagcaaggatactggcggcaattggacggcgacctttgatccggccagc
tacagcgaaaatatccagcaactcatcacccggtttaaaacaacgaccgatctagacaag
gtcacgttctccgcagtcgtcgtggaccaagccggtaaccagagcgtaccgggcagcttg
aagaactttgccgaaggtggcgtagacaacatctggatcgacctgaaagcaccagcgaaa
cccagcctggtcgccctcaacagggctagcgacaccggccgcgacgatgctccggacacc
cgcgctgacggcatcacttcgatggccaagccgaccctccagatcgagggtggcgaaccg
ggcgggtttgcgcgcgtctatgccaatgccgacgggacgggcctgttgggcgaaggacgc
atcagcaatggacagagtctgacaggcggcagcgtcaacagtgcttctgtggcgctcacc
ggaggcaccggcctggtcaacggcgccaatacggtgtacgtgcagttgatcgatgccgct
ggcaacaagagcgagatccaatcgaagcagattgaagtcctgctcccgctccccatggac
gcaagggcggatatcgccctcaccagcaccgccccgcacaacggcttctacgtcacaggc
gatgtgatcgaggtccaggtcaccttcgaccgcgaggtctacctgaagcagggtaaggtg
accgaccagctttatgtgaacctgatccaggatggcaccggcgcgaatgctgccaagatc
ttgaaagcgacttaccaaagcggcctgggcaagggtactaccgatcccggcagcaaggtc
ctgaccttcaaatacacggtgggggctggtgatgatgcaccagctggcgtgaagtacaag
gttggggacctgatcaacgtaggccacgtgctggaagacaaggccggcagcgatgttcct
gggatgagcaagccatatactggcgccggcctgaccatcgacaccgtcgccccccccgtc
ccggcactcacgctggatgccgatttgttatcccacgaggcacgcgccacggcagaggta
gccaagggccagccgctgaaggtgaggggcagtgaggtaggctccaagctggcaatcaag
ttgaccaacgccagcggcgtagtcgagaacctcgatccattgactgctaccggcgccggc
cagaccatcaacctgaccgacgtgcagatcgccaagctgggcgacggcctcatcacggtc
accgccatggccagtgatacggcgggcaatgtcagagcagcagccgagacgaagttcacg
ctggacaccaccgcgcccgccgtgagcgccagcgtcacggcgacgggtggcggtcagcct
cccgccgtcacgaaagagcagatcagcttcgtggtcaccttcaacgaaaagctgcgcgtc
cccgtcacaatcgacaacttcaccgccaccaacggcacggtcaacaaggtggaagccgtg
accggtgccggcaacacaaacgccaatagctataccgtcctcgtgacgcccaatcccgac
atgcctgccggcaacaaggtcgagctcaaactcaaggccaatggcgctacgcccgttctg
gacgtggccggcaatcccgccgaactcggcgcggtcatcgcgtcccaggccatcgatacg
cggggaccgaccgtcatctccgtgcctgctgacaatgcgccgcccgcgccaccgacgatg
aacaaggatatcgtcttcaacgtccgtttcgatgagatgggctctgtgtcccagatgggc
aacatcggcgtaggcaacttcaaggccatcaatggcaaggtcaccaaggttgagccggtg
ggagcgtccaggacggagtacaacgtcacggtcaagcccaatgccgagctgaccggcaac
agcaacgaagtccagctgaatttctttgccgtggccgacatccggatggggcagggcagc
gccggcgtcgccgatagcctgggcaatgcggccagggatcagcccaacatcgcccgccag
atcatcgatgtccagcagcccagcatcaccgcagacggtgtctccgtgagcagccgctcc
cttgccagcggcaaccccgataagcctggctacgtccatgccggcgacaccgttcgcttg
gccgtcgtcttcgacgaagccgttaccgtcagcggcacgcccaagctgaacctgcaagtc
ggggccaacacccgtagtgcttcctacaagacgcttagcaccgacggcaagaccgcctac
ttcgactatgtgctgacagccgccgacacggcgaccgatggcatctccattccggctaac
gcgctgcagttgcccaccggggcgagaatcactgacctggctggcaacgcggccaaggtg
gacagcagtgtcgtggcgctcaatcctgcctacaaggtcgataacagcgcacctaccctg
accgaggtcaaggtcagcgagatgaccgctgacaatggcagcggcatctacaaggctggc
tccgtcattaccgtacaggccaagttcagcgagccggtcgatatcaatacgaccggaggc
gcgcctcggatcaagctcacgataggaggtgatgaacgcacggcagcctatgtggatagg
gtgcccggcgatgcgccggacgtcctgaaattcagctacaccgttctctcgggtgacaac
gctccggcaggcgtcgccatcccggcgtcgccgctcgttctcaatggcgcgagcattact
gatgtgtccggcaatcgcgccgtgctcacgctgggtggcgtacagcccaatgcttccttc
aagatcgacactaccgcccccaccgtcaccgccgtggcgatagagagcgccagcgtcagc
ggcacggaaggcaactatcgtgctggcgacgtcatcaccgccgtggtcacctttagcgaa
gaggtcaagcttgcgcccaacgcccaggccagcctgaatctgatggtcggtggcgatagt
cgcaccgccaccttggtcacccctacggccaatgcagcatctaacactctgcgtttcagc
tataccttgcagtccgctgacgccgatagcaatggcatctccatcgcccccaacagcctg
gctcttgccggcgtgaccgacaaggctggcaacgccgccgcaccggcgcatgtggccgtg
gccgacaacccgttgttcaaggtggataacgctgcaccgaccatcctcagcttcagcact
accacgcctgacggcacctacaacatcggcaaggtgatcaacctgcgcgccacggctagt
gaggagctgcgccccggcgcgaagatcacggtcacgctcgacaacggcgacaccgccgtg
ctcacccgtgacgccagcaatcggaccctgctggaaggcagttataccgttgtcggcggc
aagccatccacgaacgacctgacggtgaccagctttacacaggccgccaaagacctggcc
ggcaacgacctgctgactaccatgcccgcagccggcaagaacctgggcgacaaccgcgcc
atcgtgctcgacgccatgatgccgccgcagccgaccatgttcagactcgacgccgccagc
gacggtggcgccagccccaacgatgggctcatcagcgaggtcttgccgaccttccatttc
gacgggctggtccgtggcgccacggtgacggtgaccggtaccttcaagggtgttacccag
accctgctgcaattcaccgccagcgccaccgcgcaagatcagaaactcaccacgccgctg
actgacggcgtctacaccgatatctcggtgatccagacctcgccctccggcaatgccagc
cagccgcgcttgctgggcaacgtgaccacgcctggcagcctggaactgtccaccgccgcg
ccgggcgtggcgagccagctggtcttcgatatcgaccaggatttgcagaccgaggcgtcc
ctggagacaggtgcgccagccaatgcaccgcgcgacttcatcacgctgatccgtactccc
aagttcaatttccagggtggcaatgacggtgaggtcgcggtgctgttccgcgacaccaac
ggcaataacatggtggatgccggcgagcaggtgctgggccgccagatcatcggtgtgacc
aatgccaccaactaccgccttcagcccggcactagcgggaatggcctgaacggtcactac
gtcgaggtcgctgccgaaaacgcactgggcaatggcccctataccgatatcaagctggcc
ttgcagagcaagtacgggacctatggcacggccgtgccgatggcgcggggagcaaccagc
ggctcgggggccggcggtatcacggtgatcaataacaagccggttcccgacattaccggc
gtcaccaccaatgcgaccgctggcgagagcagcgccgccaccatgagctttaacgtcaga
ggcggtcagactggcgcacgcatcatcatcaaggcggaccgcttggatgacaacggcacg
ctcatcgcggcgcagcaagaaattggccggggcgtaccggatggcaatggcgtgctcacg
cttcaggttggccagttcaatggcagctatggcaatttcaaggctactcaggattatgcg
gggaggatcagtaatgtcgctgtcacaacggtgactaacaccgggccccaaccgctggga
accatcacctgggaccatctgccgatctcggtcactgcctcgaccgaccttgctgcgaat
tcccgtcccggtacgcctttcacggtgaagttcgacttcagcaaagcacctaacggcttt
gcacaggatgatattgccgtgaccggtagtggtgtcttgtctgcatttgctcccgtgctc
ggttctaacaacaaacggtattccgccaccttcacgcctacggatgcaacggtcacccgc
gccacgttccaggtgaaggatggctcctacaccgagccgaacaaccagtccggcgcggcc
agcaacaagctggagctcgtcttcaacagggccggcgcagtggcagtgtcgggagccagc
gccgatggcaagccgcagttgggcgacaccctcacggccactgtcagtgatcccgacggc
gtcaagagcgatgtgcctgttgcctatgtctggaaggccggtggcgtcgccattgtcggc
gcgaccggggccagcttgaggctcaccgatgcgcaaatgggcaaggcgatcagtgtcgag
gcccgttataccgacaacctcggcttggctgaagtctcgtcctcggcaagcacccctaac
gtgaccggacccaatgcgccgggcgtgctgaagttcacggtcaacggccaggaaacctcc
gtcgtgcgcctgggcgataacgtcacggcagtcttgagcgatggggatggcttcgatcct
gcgcgggtgacctacagttggcggggcgagaggctggcacgtccgctgaagggcgccgat
aatgccaccggaagcacgttccagatcgctcaagatgaggatgtacactcctttggaacg
actcagattctggttcaggcggagtatacagatctgcatgggacatccgagcgtgtttcg
ggatatgcctacttgaaatatccccagcgtcccggcacggtggtcttcgatgcactgaat
ccgccgaacacgccttaccgatcaggcgatgagcttcacgcgatcgtcaaggacgacaac
ggtaccggcaatggtggcgtgacctacacatggtatgccaatgacacggtgatccccggg
cagaccgggtcgcacttgcagttgatcgatgcctatcgcggcaaggccatcaaggtgagc
gtgagctacaccgatggcgagggtctgctggaaacgccgaccagccaagctatccgtgtc
gagcaacccaacaacaacgcaccggttggcgccgtcaccctcgcaggctcaggcgagctg
ggtacgacggtcacggcgtccaataccatcaccgatgccgacggaatgcccggccagatc
acctacaagtggttcgccagcggcgacgccgccaccaagggcgatctgatcaccgcgccg
gtgttcgtcaataacgactccagcaagctgctgatcaccagcgacctggtgggcaagtcc
ttgaaggcggaggcgaattacaccgatggccagggcaccgacgagaaggtgctcgccgct
acggccaagaccgcgggctggatgacctccgtcacgctgggcaatctcagctacgcccag
ttcgaggcgcaaccccaggtcgtcagtggcgccaagctgatctcccgtcatccgaccagc
aacgtcttcatcctcgacgtcaacggcgatggccagatcaccgctgccgacgccaccacc
tacatcaccagcctggacgccaacggcagcatcagcttcaccaccgaggccggccgcggc
aaggccaccttgttggccgcgaactcaccgctgtgggcgacattgctgccccagcctgcg
gaatggggaccggccaatggcgtctttggcttacccgcccggaatggccagccagcggtg
accggcggcgatttctggacttccacggcgggtacggcggcagattcccatcaggtatgg
agcaagagcggcgccgccgatggcaccccgggggcctatgagcagagcaatgcctcgtac
atgaacgatcccaatcgcctgcacttcaacgtcttccaggtcagcgtcctgccagcgtga
DBGET
integrated database retrieval system
