Herbaspirillum seropedicae Z67: ACP92_15630
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Entry
ACP92_15630 CDS
T04519
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
hsz
Herbaspirillum seropedicae Z67
Pathway
hsz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACP92_15630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsz03400
]
ACP92_15630
Enzymes [BR:
hsz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ACP92_15630
DNA repair and recombination proteins [BR:
hsz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ACP92_15630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
DUF8358
Motif
Other DBs
NCBI-ProteinID:
AKN66523
LinkDB
All DBs
Position
3571880..3572647
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AA seq
255 aa
AA seq
DB search
MKIATWNVNSLKVRLPQVLKWLEENPVDVLCLQETKLTDDKFPAAEIAAAGYLVEFSGQK
TYNGVAILSRHPMNDVVKNNPLFPDEQQRIIAATIEGVRYVCAYIPNGQSLESEKYPYKL
NWLAALHEWLAQEKAKNPRLALLGDYNIAPEDRDVHDPVAWQGQVLVSEPEREAFRKLQA
LGLTDSYRLFEQPEKMYSWWDYRQMGFRLNRGLRIDHILLSEELVPRCTACVIDKVPRKW
EQPSDHAPVIATLAD
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgccacctggaacgtcaactccctcaaagtccgcctgccgcaagtgctcaaa
tggctggaagaaaacccggtggatgtgctctgcctgcaggaaaccaagctcaccgacgac
aagttccccgctgccgagatcgccgctgcgggctacctggtggagttttcgggacagaag
acctacaacggcgtggccatcctgtcgcgccatccgatgaacgatgtggtcaagaacaat
cccctgttccccgatgaacagcagcgcatcatcgccgccaccatcgagggggtgcgctat
gtctgcgcctatatccccaacggccagtcgctggagtccgaaaagtatccctacaagctg
aactggctggccgcgctgcatgaatggctggcccaggaaaaagccaagaacccgcgcctg
gcgctgctgggcgactacaacatcgcccccgaagaccgcgacgtgcatgatccggtggcc
tggcaaggccaggtgctggtgtccgaacccgagcgcgaagccttccgcaagctgcaggcg
ctgggcctgacggattcctaccgcctcttcgaacagccggaaaagatgtacagctggtgg
gattaccgccagatgggcttccgcctcaaccgcggcctgcgcatcgaccatatcctgctg
tccgaagaactggtgccgcgctgcaccgcctgcgtcatcgacaaggtgccgcgcaagtgg
gaacagccttcggatcacgcgccggtgattgcgacgctggcggactga
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