Herbaspirillum seropedicae Z67: ACP92_17965
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Entry
ACP92_17965 CDS
T04519
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hsz
Herbaspirillum seropedicae Z67
Brite
KEGG Orthology (KO) [BR:
hsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsz03016
]
ACP92_17965 (truB)
Enzymes [BR:
hsz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACP92_17965 (truB)
Transfer RNA biogenesis [BR:
hsz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACP92_17965 (truB)
Prokaryotic type
ACP92_17965 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AKN66953
LinkDB
All DBs
Position
complement(4126171..4127175)
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AA seq
334 aa
AA seq
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MADDTTADTMSAPPDTAQPRAKRGQPVRTPRLPRVPVHGVLLLDKPVGLSSNDALIRAKR
MLNAPKAGHTGTLDPFATGLLPLCFGEATKFSQDLLEADKTYEAVVHLGVRTDTGDTEGQ
VLSERPVEVSVEQIEAAMAQFRGPISQVPPMHSALKRDGKPLYEYARAGITLEREARNVT
IHALELLNYQAPMLRIRVTCSKGTYIRVLGEDIGEVLGCGAHLNALRRIGVGPLTLEGAV
TLESVDAAGELEARKALLLPVDGLLRSFPAVQLSDELARRFLHGQRLPLGKEGVAVPQQT
GRVRVYRSSDAALLGTGLLQEYAILAPERLVSTA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgatacgacggcggataccatgtccgctcctcctgatactgcgcaaccgcgc
gccaaacgtggccagccggtccgcacgccacgtcttccgcgcgtgcccgtgcatggcgtg
ctgttgctggacaagccggtgggcctgtcgtccaacgacgcgcttatccgcgccaagcgc
atgctcaatgcgcccaaggcgggccataccggcacgctggacccgtttgcgacggggctg
ttgccgctgtgcttcggcgaagccaccaagttctcgcaggacttgctggaagccgacaag
acctacgaggcagtggtccacctgggtgtgcgcaccgataccggcgacaccgaagggcag
gtcctcagcgagcgtcccgtcgaggtcagcgtggagcagatcgaagcggccatggcgcaa
ttccgtggccctatcagccaagtgccgcccatgcactcggccttgaagcgcgacggcaag
cccttgtacgaatatgcgcgcgccggcatcacgctggagcgcgaagcccgcaacgtcacc
atccacgcgctggaattgctgaattaccaggcgccgatgctgcgcatccgcgtcacctgc
agcaaaggcacctacatccgcgtgctgggcgaagatatcggcgaggtgctgggctgcggc
gcgcacctcaatgcgctgcgccgtattggcgtgggtccgctgacgctggagggcgcggtc
acgctggagagcgttgacgccgccggtgagctggaagcccgcaaggccctgctgttgccg
gtggatggcctcttgcgcagcttccctgcggtgcaactgagtgatgagctggcgcgccgc
ttcctgcacggccagcgcttgccgctgggcaaggaaggcgtggctgtgccccagcagact
ggtcgcgtacgcgtctaccgcagttccgatgctgccttgctgggcaccggactgttgcag
gaatacgccatcctggcccccgaacggctggtctccaccgcctga
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