Herbaspirillum seropedicae Z67: ACP92_17990
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Entry
ACP92_17990 CDS
T04519
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
hsz
Herbaspirillum seropedicae Z67
Brite
KEGG Orthology (KO) [BR:
hsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsz03009
]
ACP92_17990
Enzymes [BR:
hsz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
ACP92_17990
Ribosome biogenesis [BR:
hsz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ACP92_17990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AKN66958
LinkDB
All DBs
Position
complement(4133170..4135197)
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AA seq
675 aa
AA seq
DB search
MKPTSSKDDTQVELAAADAAAADKPVKKRTRKTAASADAPAAAPAAAEAADTAAPAPKKR
AVRAKKPAADEAAVVAEAAAAPAPEKKPRATKPRAKKAEEPQVAEAAAPAQMSLDMDAPA
KAKPAKTAKPRGKAKPVEAEQIAAPAPAELPKVIVTVGDEVVAPPVLLDAPADPNRNKPA
RRGVRGPRALRNNRAAQRAAASAEGGVPGKADNGAAPEQQPRGQFGKGHGQGGQNAQNGQ
GQQGKKNFDKNGKKPKAPQLGLRAAEPVDDIFSYVTSEAYDRDENPKGGARQPHQMRGKN
GRRDLTAEDDAPKLHKVLADAGLGSRRDMEELIVAGRVSVNGEPAHIGQRILPTDAVRIN
GKLIQRKVSKRPPRVLVYHKPAGEIVSHADPEGRNSVFDRLPTMKAGKWLAVGRLDYNTE
GLLLFTTSGDLANRLMHPRYNIEREYAVRTLGELEEGMRQKLLSGVELDDGPAQFSRIAD
GGGEGVNKWYRVTIGEGRNREVRRMFEAVGLTVSRLIRTRYGAMTLPQTLRRGRWEELEE
NAVRNLMAACGLEKQAGEGKSGNGGHAGKGQGNGNGPRGNAMQNKGPQKGRGGNYGNQGG
NYGNQGGNYGNQGGGYGGGNKGGQPKSRQPDPLQTALGFPDAGQRRNNRPQRGGNSAPNF
MLGGLPGMNRRRGGR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaactagttccaaagacgacacccaggtcgaacttgctgcggccgacgccgct
gccgccgataagccggtgaaaaagcgcacccgcaagacggcggccagcgccgatgcgcct
gctgctgcgcccgcggcggccgaagcggccgataccgctgcgcctgcgcccaagaagcgc
gccgtgcgcgccaagaaaccagcggctgacgaagcggcggtagtggccgaggcggctgca
gctccggcgccggagaaaaagccgcgcgccaccaagccgcgcgccaagaaggctgaagag
ccgcaagtggccgaggctgccgcgcctgcgcaaatgagcctggacatggatgcaccggcc
aaggccaagccggccaagaccgccaagccgcgtggcaaggccaagccggtcgaggccgag
cagatcgctgccccggcgccggccgagctgcccaaggtgatcgtcacggtcggcgacgag
gtggtggcgccgccggtgctgctggatgcgcccgccgatcccaatcgcaacaagcctgcc
cgccgtggcgtgcgcggtccgcgcgcactgcgcaacaatcgtgccgcgcaacgcgctgcc
gccagcgccgagggtggtgttcccggcaaggccgataacggcgctgcacccgagcaacag
ccgcgcggccagtttggcaagggccatggccagggtggccagaatgctcagaacggccag
ggccagcagggcaagaagaatttcgacaagaacggcaagaagcccaaggcgccgcaactg
ggtctgcgcgccgccgagccggtggacgatatcttctcctacgtcacttccgaagcctat
gaccgcgacgaaaaccccaagggcggcgcgcgccagccgcatcagatgcgcggcaagaac
ggccgtcgcgacctgaccgccgaggacgatgctcccaagctgcacaaggtgctggccgac
gccggcctgggttcgcgccgcgacatggaagagctgatcgtggccggccgcgtctcggtc
aatggcgagcccgcccacatcggccagcgcatcctgcccaccgatgccgtgcgcatcaac
ggcaagctgatccagcgcaaggtgagcaagcgcccgccgcgcgtgctggtctatcacaag
cctgccggcgagatcgtcagccatgccgatccggaaggccgcaattccgtcttcgaccgc
ctgcccaccatgaaggccggcaagtggctggcggtgggccgcctggattacaacaccgaa
ggcctgctgctgtttaccacctccggcgacctggccaaccgcctgatgcacccgcgctac
aacatcgagcgcgagtatgccgtgcgcacgctgggcgagctggaagaaggcatgcgccag
aagctgctgtccggcgtggagctcgatgacggcccggcgcagttctcgcgtatcgccgat
ggtggaggcgaaggcgtcaacaagtggtaccgcgtgaccatcggcgaaggccgtaatcgc
gaagtgcgccgcatgttcgaggccgtcggcctgaccgtctcgcgtctgatccgtacgcgc
tacggcgccatgaccctgccgcagaccctgcgtcgcggtcgctgggaagagctggaagaa
aacgccgtgcgcaacctgatggcggcctgtggcctggaaaagcaggccggcgaaggcaag
tccggcaacggcggccatgcaggcaaggggcagggcaacggtaatggcccgcgtggcaat
gcgatgcagaacaaggggccgcaaaagggccgtggcggcaattacggcaaccagggcggc
aactacgggaatcaaggcggcaactatggcaaccagggtggtggctatggtggcggcaac
aagggtggtcagcccaagagccgccagcccgatccgctgcagaccgcgctgggcttcccc
gatgccggccagcgtcgcaacaaccgtccgcaacgcggcggcaacagtgcgcccaacttc
atgctcggcggtttgccgggcatgaatcgccgtcgcggcggtcgctga
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