Herbaspirillum seropedicae Z67: ACP92_18390
Help
Entry
ACP92_18390 CDS
T04519
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
hsz
Herbaspirillum seropedicae Z67
Pathway
hsz03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hsz00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
ACP92_18390 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hsz03011
]
ACP92_18390 (rpsA)
Ribosome [BR:
hsz03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
ACP92_18390 (rpsA)
Bacteria
ACP92_18390 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
AKN68313
LinkDB
All DBs
Position
complement(4218938..4220566)
Genome browser
AA seq
542 aa
AA seq
DB search
MRSGEVISAEVVRLDHNFVIVNAGLKSEAFIPVEEFKNDNGEVEVNVGDFISVAIESLEN
GFGDTILSRDKAKRLASWLSLEKAMESGEIVTGTVNGKVKGGLTVLTNGIRAFLPGSLVD
TRPVKDTTPFEGKTLEFKVIKLDRKRNNVVLSRRAVIEASMGEERAKLMETLKEGTVVTG
IVKNITDYGAFVDLGGIDGLLHITDLAWRRVRHPSEVLSVGQEITAKVLKYDQEKNRVSL
GVKQLGDDPWTGLSRRYPQGTRLFGKVTNLTDYGAFVEVEQGIEGLVHVSEMDWTNKNVA
PNKVVQLGDEVEVMVLEIDEERRRISLGMKQCKPNPWDDFAMSHKKGDKVKGSIKSITDF
GVFIGLPGNIDGLVHLSDLSWTEAGEEAVRKFKKGDELEAVVLAIDVERERVSLGVKQLE
GDPFNNFAALNDKGAIVTGTVKSVEPKGAVIQLTDEVEGYLRASEISRDRVEDAGTHLKV
GDSVEALVINIDRKARSIQLSIKAKDNAETQEAMQKMSADSNAASGTTSLGALLKAKLDN
KN
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcgggtgaagtcatctcggcagaagtcgtgcgcctggatcacaacttcgtgatc
gtcaacgccggcctgaagtccgaagctttcatccctgttgaagaattcaagaacgacaac
ggcgaagtcgaagtcaacgtcggcgacttcatctccgttgcgatcgaatccctggaaaac
ggtttcggcgacaccatcctgtcgcgcgacaaggccaagcgtctggcatcgtggctctcg
ctggaaaaggcgatggagtctggcgagatcgtcaccggcaccgtcaatggcaaggtcaag
ggcggcctgaccgtgctgaccaacggcatccgcgccttcctgccggggtcgctggtcgac
acccgtccggtcaaggacaccaccccgttcgaaggcaagaccctggaattcaaggtcatc
aagctggaccgcaagcgcaacaacgtggtgctgtcgcgccgcgccgtgatcgaagcctcg
atgggcgaagagcgcgccaagctgatggaaaccctgaaggaaggcaccgtcgtcaccggt
atcgtcaagaacatcaccgactacggtgcgttcgttgacctgggcggcatcgacggcctg
ctgcacatcaccgacctggcatggcgtcgcgtgcgtcacccgtcggaagtgctgtcggtt
ggccaagagatcaccgccaaggtcctgaagtacgatcaagagaagaaccgcgtctccctg
ggcgtgaagcaactgggcgacgatccgtggaccggtctgtcgcgtcgctacccgcaaggc
acccgcctgttcggcaaggtcaccaacctgaccgactacggtgcattcgtggaagtcgaa
caaggcatcgaaggcctggtgcacgtctccgaaatggactggaccaacaagaacgtggcc
ccgaacaaggttgtccagctgggcgacgaagtcgaagtcatggttctggaaatcgacgaa
gagcgtcgtcgtatctccctgggcatgaagcagtgcaagccgaacccgtgggacgacttc
gccatgagccacaagaagggcgacaaggtcaagggttcgatcaagtcgatcaccgacttc
ggcgtcttcatcggcctgccgggcaacatcgacggcctggtgcacctgtccgacctgtcc
tggaccgaagctggcgaagaagccgtgcgcaagttcaagaagggcgacgagctggaagcc
gttgtgctggccatcgacgtggaacgcgagcgcgtttccctgggcgtgaagcagctggaa
ggcgacccgttcaacaacttcgctgcgctgaacgacaagggcgcgatcgtgaccggtacc
gtcaagtcggttgagcccaagggcgctgtgatccagctgaccgacgaagtcgaaggctac
ctgcgcgcttccgaaatctcccgcgaccgcgtggaagatgccggcacccacctgaaggtt
ggcgattccgtcgaagccctggtcatcaacatcgaccgcaaggcacgcagcatccagctg
tcgatcaaggccaaggacaacgccgagacccaggaagccatgcagaagatgtcggctgac
tccaacgctgcttcgggcaccaccagcctgggcgcgctgctgaaggccaagctcgacaac
aagaactga
DBGET
integrated database retrieval system
