KEGG   Herbaspirillum seropedicae Z67: ACP92_21435
Entry
ACP92_21435       CDS       T04519                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
hsz  Herbaspirillum seropedicae Z67
Pathway
hsz00300  Lysine biosynthesis
hsz00470  D-Amino acid metabolism
hsz01100  Metabolic pathways
hsz01110  Biosynthesis of secondary metabolites
hsz01120  Microbial metabolism in diverse environments
hsz01230  Biosynthesis of amino acids
Module
hsz_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:hsz00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    ACP92_21435
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    ACP92_21435
Enzymes [BR:hsz01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     ACP92_21435
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: AKN67563
LinkDB
Position
4907332..4908195
AA seq 287 aa
MKIKFTKMHGAGNDFVVLDAINQSISLSPAQWQFIADRRFGIGADQMLVVEKARGEGVDF
RYRIYNADGGEVEQCGNGARAFVKFVTDKGLTSKRAIRVETMSGVIEPRLEDDGQITVDM
GAPILTPADVPFDSHGLQHRNEAEDTLWPLDVAGKTTWISVVSMGNPHAVQVVEDSEAAP
VLSEGPLIERHERFPKRVNAGFMQVVDRHHVNLRVYERGAGETLACGTGACAAVVAGIRR
GLLDSPVAVQTHGGVLNIAWAGPGEAVMMTGPAVSVYEGEIELPDQL
NT seq 864 nt   +upstreamnt  +downstreamnt
atgaaaatcaaattcaccaagatgcatggcgcgggcaacgactttgtcgtcctcgacgcc
atcaatcaatcgatctccctcagcccggcgcaatggcaattcattgcggatcgccgcttc
ggcattggcgccgaccagatgctggtggtggagaaggcgcgtggcgaaggtgtcgatttc
cgttatcgcatctacaacgccgatggcggcgaagtggaacagtgcggcaatggcgcacgc
gccttcgtcaagttcgtcaccgacaagggcttgaccagcaagcgcgccatccgtgtggaa
accatgtcgggcgtgatcgaaccgcgcctggaagacgatggccagatcacggtggacatg
ggcgctcccatcctcaccccggccgacgtccccttcgacagccacggcctgcaacaccgc
aacgaagccgaggacacgctgtggccgctggatgtagccggcaagaccacctggatctcg
gtcgtctcgatgggcaacccgcacgcagtacaggtggtggaggacagcgaagcagccccg
gtgctgagcgaggggccgctgatcgagcgtcatgaacgctttcccaagcgcgtcaatgcc
ggtttcatgcaggtggtggatcgccaccatgtgaacctgcgggtctatgaacgcggcgcc
ggcgaaaccctggcctgcggcaccggcgcctgcgccgccgtggtggcgggcatccgccgg
ggcctgctggattcgccggtggccgtacagacccatgggggcgtactgaacatcgcctgg
gccggccccggcgaagcggtcatgatgaccggcccggcggtctcggtgtacgaaggcgag
atcgagctgcctgatcagctctga

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