Herbaspirillum seropedicae Z67: ACP92_21435
Help
Entry
ACP92_21435 CDS
T04519
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hsz
Herbaspirillum seropedicae Z67
Pathway
hsz00300
Lysine biosynthesis
hsz00470
D-Amino acid metabolism
hsz01100
Metabolic pathways
hsz01110
Biosynthesis of secondary metabolites
hsz01120
Microbial metabolism in diverse environments
hsz01230
Biosynthesis of amino acids
Module
hsz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hsz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACP92_21435
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ACP92_21435
Enzymes [BR:
hsz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ACP92_21435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AKN67563
LinkDB
All DBs
Position
4907332..4908195
Genome browser
AA seq
287 aa
AA seq
DB search
MKIKFTKMHGAGNDFVVLDAINQSISLSPAQWQFIADRRFGIGADQMLVVEKARGEGVDF
RYRIYNADGGEVEQCGNGARAFVKFVTDKGLTSKRAIRVETMSGVIEPRLEDDGQITVDM
GAPILTPADVPFDSHGLQHRNEAEDTLWPLDVAGKTTWISVVSMGNPHAVQVVEDSEAAP
VLSEGPLIERHERFPKRVNAGFMQVVDRHHVNLRVYERGAGETLACGTGACAAVVAGIRR
GLLDSPVAVQTHGGVLNIAWAGPGEAVMMTGPAVSVYEGEIELPDQL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaaattcaccaagatgcatggcgcgggcaacgactttgtcgtcctcgacgcc
atcaatcaatcgatctccctcagcccggcgcaatggcaattcattgcggatcgccgcttc
ggcattggcgccgaccagatgctggtggtggagaaggcgcgtggcgaaggtgtcgatttc
cgttatcgcatctacaacgccgatggcggcgaagtggaacagtgcggcaatggcgcacgc
gccttcgtcaagttcgtcaccgacaagggcttgaccagcaagcgcgccatccgtgtggaa
accatgtcgggcgtgatcgaaccgcgcctggaagacgatggccagatcacggtggacatg
ggcgctcccatcctcaccccggccgacgtccccttcgacagccacggcctgcaacaccgc
aacgaagccgaggacacgctgtggccgctggatgtagccggcaagaccacctggatctcg
gtcgtctcgatgggcaacccgcacgcagtacaggtggtggaggacagcgaagcagccccg
gtgctgagcgaggggccgctgatcgagcgtcatgaacgctttcccaagcgcgtcaatgcc
ggtttcatgcaggtggtggatcgccaccatgtgaacctgcgggtctatgaacgcggcgcc
ggcgaaaccctggcctgcggcaccggcgcctgcgccgccgtggtggcgggcatccgccgg
ggcctgctggattcgccggtggccgtacagacccatgggggcgtactgaacatcgcctgg
gccggccccggcgaagcggtcatgatgaccggcccggcggtctcggtgtacgaaggcgag
atcgagctgcctgatcagctctga
DBGET
integrated database retrieval system