Herbaspirillum seropedicae Z67: ACP92_22540
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Entry
ACP92_22540 CDS
T04519
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
hsz
Herbaspirillum seropedicae Z67
Pathway
hsz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACP92_22540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsz03021
]
ACP92_22540
Transcription machinery [BR:
hsz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACP92_22540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_ECF
Sigma70_r4_2
HTH_28
HTH_23
HTH_11
Sigma70_r4
T7SS_signal
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AKN67756
LinkDB
All DBs
Position
complement(5170883..5171419)
Genome browser
AA seq
178 aa
AA seq
DB search
MPAMEELHVDPLETLYRDHHGWLRAWLRRKLGCTEQAADLAHDTFLRLLATRDVLSALKE
PRAYLVTAARHLLIDRSRRQQIRQAYLDQLERQFGACPELMHAPSAETILQAVQAIEALG
RALQAARAEAAEAFILHYVQGRRQEELASHFNVSLRTVQGWLAQALIQCHRHLAAPGA
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgccggccatggaagagctgcatgtggatccgcttgaaacgctctatcgcgaccatcac
ggatggctgcgcgcatggttgcgccgcaagctgggctgtaccgagcaggccgccgatctg
gcgcatgacaccttcctgcgcctgctcgccacccgcgacgtgctctccgcgctcaaggaa
ccgcgcgcctacctggtcactgccgcccgtcacctgctgatcgatcgcagccgccggcaa
cagatccgccaggcctacctggaccagctcgaacggcagttcggggcctgccccgaactc
atgcatgcgccctcggccgagaccatcctgcaagccgtgcaggccatcgaggcgctgggc
cgggcgctgcaggcggcgcgcgccgaggccgccgaggccttcatcctgcattacgtgcag
gggcgcaggcaggaggagctggccagccacttcaacgtctcgctgcgcaccgtgcagggc
tggctggcgcaggcgctgatccagtgccaccgtcatcttgcagcgccgggcgcatag
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