Herbaspirillum seropedicae Z67: ACP92_23310
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Entry
ACP92_23310 CDS
T04519
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hsz
Herbaspirillum seropedicae Z67
Pathway
hsz00550
Peptidoglycan biosynthesis
hsz01100
Metabolic pathways
hsz01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ACP92_23310
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ACP92_23310
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hsz01011
]
ACP92_23310
Enzymes [BR:
hsz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ACP92_23310
Peptidoglycan biosynthesis and degradation proteins [BR:
hsz01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
ACP92_23310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AKN67888
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Position
5350053..5352023
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AA seq
656 aa
AA seq
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MTEFKNTAHELRLFRIRLLAVSVLVLVCFSLLLARFLWLQVVRHDAYAAQAEENRISVVP
IVPNRGLILDRNGVVLARNYSAYTLEITPSKIRTNIDDLIDELGTLVEIQPRDRRRFRRL
QEESKNFESVPIRTRLTDEEVAKFTAQRYRFPGVEVQARLFRQYPYGKTAAHVIGYIGRI
SQRDAERIADSDDEANYNGTDYIGKEGLEKSYESQLHGTTGYEEVEISASGRAVRSLSRT
PATPGKNLILSIDIELQKVVEEAFGDQKGALVAINPATGDILAYVSQPSYDPNLFVEGID
QQSWDELNKSPDRPLLNRPLSGLYSPGSTYKPFMALAALELGKRRPQDAIRDPGYFILGN
HRFRDDKEGGHGVVDMYRSVVVSCDTYYYMLANDMGVNAIHDFMKPFGFGQITGIDLEHE
KRGILPSTEWKRTAFRKPEQKRWIAGDTVSLGIGQGYNSFTPLQLAQATAILANNGVVMK
PHLVKIVEDGVTHERTETVPKESYRIPMKQENIDFIKRAMVGVVKEGTGAAAFRGAPYES
GGKTGTAQVVNIAKNQKYDSKKLSRIYHDNGLYIGFAPADAPRIAIAAVVENGGWGAGVA
APLVRKAMDYFMLGKRPNEPIKSIAPAEAVTADTPVEGPTSEDNGATPTVQPDVQE
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaattcaagaataccgcgcatgagctgaggctgttccgcatacgcctgctggcg
gtgagcgtgctggtgctggtctgcttcagcctgctgctggcgcgctttctgtggctgcag
gtggtgcgccacgacgcctacgccgcccaggccgaggaaaaccgcatctcggtggtgccc
atcgtgcccaaccggggcctgatcctggaccgcaacggcgtggtgctggcgcgcaattac
tcggcctacacgctggaaatcaccccttccaagatccgcaccaacatcgatgacctcatc
gatgagctgggcacgctggtggaaatccagccgcgcgaccgccgccgcttccgccgcctg
caggaagaatccaagaacttcgaaagcgtccccatccgcacccgcctgaccgatgaggaa
gtggccaagttcaccgcccagcgctatcgcttcccgggcgtggaagtgcaggcccgcctg
ttccgccagtatccctatggcaagacggcggcgcacgtgatcggctacatcggccgcatc
agccagcgcgatgccgaacgcattgccgattccgacgacgaggccaactacaacggtacc
gactacatcggcaaggaaggcctggaaaagagctacgaaagccagctgcacggcaccacc
ggctacgaggaagtggaaatctcggccagcgggcgcgcggtgcgttcgctctcgcgcacg
ccggccacgcccggcaagaacctgatcctgtccatcgacatcgagctgcagaaggtggtg
gaagaagccttcggcgaccagaagggcgcgctggtcgcgatcaacccggccaccggcgac
atcctggcctatgtctcgcagccctcctatgaccccaacctgttcgtcgaaggcatcgac
cagcagagctgggatgagttgaacaagtcccccgaccggccgctgctgaaccgccccctg
tcgggcctgtattcgcccggttcgacctataagcccttcatggcgctggccgcgctggag
ctgggcaagcgccgcccgcaagacgccatccgcgaccccggctacttcatcctgggcaac
caccgtttccgcgatgacaaggaaggtggccacggggtggtggacatgtaccgctcggtg
gtggtctcctgcgacacctactactacatgctggccaatgacatgggggtcaacgccatc
catgacttcatgaagccgttcggcttcggccagatcaccggcatcgacctggagcacgag
aagcgcggcatcctgccctccaccgagtggaagcgcaccgccttccgcaaacccgagcag
aagcgctggatcgccggcgacaccgtctcgctgggcatcggccagggttacaacagcttt
acgccgctgcaactggcgcaggccacggccatcctggccaacaacggcgtggtgatgaag
ccgcacctggtcaagatcgtcgaggatggcgtgacccacgagcgcaccgagaccgtgccc
aaggaaagctaccgcatcccgatgaagcaggaaaacatcgacttcatcaagcgcgccatg
gtgggcgtggtcaaggaaggcacgggcgccgccgccttccggggtgcgccctatgaatcg
ggcggcaagaccggtacggcgcaggtggtcaacatcgccaagaaccagaagtacgactcc
aagaagctctcgcgcatctaccacgacaacggcctgtatatcggctttgccccggccgat
gcgccgcgcattgccattgcggcggtggtcgagaacggtggctggggcgctggcgtagcc
gcgccgctggtgcgcaaggccatggactacttcatgctgggcaagcgtcccaacgaaccg
atcaagtcgatcgcgcccgccgaggccgtgaccgccgatacgccggtcgaaggcccgacc
tccgaggacaacggcgccacgccgacggtccagccggatgtgcaggaatga
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