Herbaspirillum seropedicae Z67: ACP92_23945
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Entry
ACP92_23945 CDS
T04519
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
hsz
Herbaspirillum seropedicae Z67
Brite
KEGG Orthology (KO) [BR:
hsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsz03016
]
ACP92_23945 (gidA)
03036 Chromosome and associated proteins [BR:
hsz03036
]
ACP92_23945 (gidA)
Transfer RNA biogenesis [BR:
hsz03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
ACP92_23945 (gidA)
Prokaryotic type
ACP92_23945 (gidA)
Chromosome and associated proteins [BR:
hsz03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
ACP92_23945 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
FAD_binding_2
Pyr_redox_2
AlaDh_PNT_C
HI0933_like
Thi4
DAO
Pyr_redox
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AKN68003
LinkDB
All DBs
Position
complement(5489415..5491343)
Genome browser
AA seq
642 aa
AA seq
DB search
MLFPTQFDVIVVGGGHAGTEAALAAARMGQKTLLLTHNIETLGQMSCNPSIGGIGKGHLV
KEVDAMGGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRILYKAAIRSRLENQPNLWL
FQQAVDDLMLEGDRVVGAVTQAGIRFAGRAVVLTAGTFLDGKIHVGLNNYSGGRAGDPPA
VSLSARLKELKLPQGRLKTGTPPRIDGRSINLAILEEQPGDLDPVPVFSVMGNAAMHPRQ
MPCWITHTNSRTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIYLEP
EGLTTHEFYPNGISTSLPFDVQLELVRSMKGMENAHILRPGYAIEYDYYDPRGLKSSLET
RQVQGLFFAGQINGTTGYEEAAAQGMLAGINAALQTQGREAWTPRRDEAYLGVLVDDLVT
QGVQEPYRMFTSRAEYRLSLREDNADLRLTEIGRELGCVGDAQWEAFDRKREAVSREMER
LKSTWVNPRILAAAEAERVLGKAIEREYNLLDLLRRPNVSYDSLMGLTGTEGQALAGPGI
EDGPVREQVEIQVKYAGYIARQADEISRQDHNENLKLPADLDYMDVKALSIEVRQKLNKH
RPETLGQASRISGVTPAALSLLLVHLKKGGLKPATATDNQAA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgctattccccacacaatttgacgtcattgtcgttggcggcggtcacgccggcaccgaa
gctgcactggccgcagcacgcatgggccagaaaaccctgctcctgacgcacaacatcgaa
accctcggccagatgtcctgcaatccctccatcggcgggatcggcaagggccacctggtc
aaggaagtagatgccatgggtggggcgatggccatcgccaccgatgaagccggtattcaa
ttccgcatcctcaattcctccaagggaccggctgtacgcgccacgcgcgcccaggccgac
cgcatcctgtacaaggcggcgatccgttcgcgcctggaaaaccagcccaacctgtggctg
ttccagcaggccgtggacgacctgatgctggaaggagatcgcgtggtgggcgccgtgacc
caggccgggatccggttcgcgggcagggcagtggtgctcactgcagggactttcctggac
gggaagatccacgtgggtctcaacaactactccggtggccgtgccggcgatccgccagcg
gtgtcgctgtcggcccggctgaaggaattgaagctgccgcaagggcgcctgaagaccggt
acgccaccgcgcatcgatggccgcagcatcaacctggccatcctggaagagcaaccgggc
gatctcgacccggtgccagtgttctccgtcatgggcaatgccgccatgcacccgcgccag
atgccgtgctggatcacccataccaacagccgcacccacgacatcatccgtggcgggctg
gatcgcagccccatgtacaccggcgtgatcgaaggcgtgggcccgcgttattgcccctcc
atcgaagacaagatccaccgcttcgccagcaaggattcgcaccagatctacctggaaccc
gagggcctgaccactcacgagttctaccccaacggcatctccaccagcctgcccttcgac
gtgcagctggaactggtgcgctcgatgaagggcatggaaaacgcccacatcctgcgtccc
ggttatgccatcgaatacgattactatgacccgcgcggcctgaagtcgtccctggaaaca
cgccaggtgcagggtctgttcttcgccggtcagatcaacggcaccaccggctacgaagaa
gccgccgcccagggcatgctggccggcatcaacgccgccttgcagacccagggccgcgaa
gcctggaccccgcgccgtgatgaagcctatctgggcgtgctggtcgacgacctggtcacc
cagggtgtgcaagagccgtaccgcatgttcaccagccgcgccgagtatcgtctctcgctg
cgcgaagacaatgccgacctgcgcctgaccgagatcggccgcgaactcggttgcgtgggc
gatgcgcaatgggaagccttcgacaggaagcgcgaagctgtttcacgtgaaatggagcgc
ctcaagtccacctgggtcaacccgcgcatcctcgccgcagctgaagccgagcgtgtgctg
ggcaaggccatcgagcgtgaatacaacctgctggacctgctgcgccgccccaacgtcagc
tacgacagcctgatgggcctgaccggcaccgaaggccaggcgctggccggccccggcatc
gaagacggcccggtgcgcgaacaggtcgagatccaggtcaagtacgccggctacatcgcc
cgccaggccgacgagatcagccgccaggatcacaatgaaaacctgaagctgcccgccgac
ctcgactacatggacgtcaaggcgctgtccatcgaagtgcgccagaagctcaacaagcat
cgtccggaaaccctgggccaggcttcgcggatttcgggcgtgaccccggcggccttatcg
ctgctgctggtgcatctgaagaagggcggcctgaagcccgccaccgccaccgacaatcag
gcggcatga
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