Haloarcula taiwanensis: BVU17_06950
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Entry
BVU17_06950 CDS
T05292
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
hta
Haloarcula taiwanensis
Brite
KEGG Orthology (KO) [BR:
hta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hta03016
]
BVU17_06950
Enzymes [BR:
hta01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
BVU17_06950
Transfer RNA biogenesis [BR:
hta03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
BVU17_06950
Prokaryotic type
tRNA splicing ligases
BVU17_06950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
MgtE_N
Motif
Other DBs
NCBI-ProteinID:
AUG47274
UniProt:
A0A2H4ZXS1
LinkDB
All DBs
Position
I:complement(1350403..1351866)
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AA seq
487 aa
AA seq
DB search
MVLELTGEHTTARVMVDDESLVESGCREQIETLIDHPAFTEPVRIMPDTHWGAGAPIGFT
MPLGDRVVPNIVGVDVGCGMAATNLGPDLPLEDAERERRVREAVPMGRNVHDYDDAVHLV
EEFPFERANRVFEQFDAAYAERFGEHIDPVEFDFDGYDEEYFESLCDRVLADQRQGMGYI
IKSAGTLGGGNHFIEFGQARESGDYWLVIHSGSRYLGKSVAEYWQSTATDRRTIGEIREQ
IPEEYVEYLKFDPDTVESRDLYAWVTGGMGESYIRKERLRRELDGSEIEDAFDALGQVQD
AIHSSDDEDRNTDLDWLEGREAHGYLVDMLFAQQYARWNRDLMSDAVCDALGIDPVDRFQ
SIHNYIDFRDLTIRKGATPARDGQRLLVPFNMADGSIIARGKGNDEYHQTAPHGAGRVMS
RRQAHSEVDMDEFAAAMDGIYSESVIEGVRDEAPMAYKDADAILSAIQPTAEVVEYVDAV
HNLKATE
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggtactcgaactgacgggcgaacacaccacggcgcgggtgatggtcgacgacgaatcg
ctcgtcgagagcgggtgtcgagagcagatcgagacgctcatcgaccacccggcgttcacc
gaaccggtgcggatcatgccggacacgcactggggagccggcgcacctatcggcttcacc
atgccgctgggcgaccgtgtcgtcccgaacatcgtgggcgtcgacgtcggctgtggaatg
gccgcgacaaacctcggaccggacctcccgctggaagacgccgagcgcgagcgacgcgtc
cgcgaggcggtcccgatggggcgaaacgttcacgactacgacgacgccgtccacctcgtc
gaggagttcccgttcgagcgggctaaccgcgtcttcgagcagttcgacgcagcctacgcg
gagcggttcggcgaacacatcgaccctgtggagttcgacttcgacggctacgacgaggag
tacttcgagtcgctgtgtgaccgcgtgctggcagaccagcgccagggcatggggtatatc
atcaagagcgcggggacgctgggcggcgggaatcactttatcgagttcggacaggcacgc
gaatcgggcgactactggctggtcatccacagtggctcccgctacctcggcaagtccgtc
gccgaatactggcagtcgacggcgacggaccgccggaccatcggcgagatccgcgagcag
attcccgaggagtacgtcgagtacctgaagttcgacccggacaccgtcgaatcccgggac
ctctacgcctgggtcaccggcggcatgggcgagtcatacatccggaaagagcggctacgc
cgggaactcgacggctccgagatcgaagacgccttcgacgcgctgggacaggtgcaggac
gccatccacagcagcgacgacgaggaccgcaacacggacctcgattggctcgaaggccgt
gaggcccacggctacctcgtcgatatgctgttcgcccagcaatatgcccgctggaaccgc
gacctgatgagcgacgccgtctgtgacgcgctgggtatcgaccccgtcgaccgctttcag
tcgattcacaactacatcgacttccgcgacctcaccatccgcaagggggcgaccccggcc
cgcgacggccagcggctgctggtcccgttcaacatggccgacgggtcgattatcgcacga
gggaagggtaacgacgagtaccaccagacagcaccacacggcgcgggtcgcgtgatgagc
cgtcggcaggcccacagcgaggtcgacatggacgagttcgccgcggcgatggacggcatc
tactcggagtccgtcatcgaaggcgtccgggacgaagcgccgatggcgtacaaggacgcc
gacgcgattctctcggccatccaaccgactgccgaggtggtcgagtacgttgacgctgtc
cacaacctgaaggcgacagagtaa
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