Haloarcula taiwanensis: BVU17_11635
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Entry
BVU17_11635 CDS
T05292
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
hta
Haloarcula taiwanensis
Pathway
hta03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hta00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BVU17_11635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hta03021
]
BVU17_11635
Transcription machinery [BR:
hta03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
BVU17_11635
Prokaryotic type
Archaeal type
TFB
BVU17_11635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Zn_ribbon_tTFIIB
Zn_ribbon_LysW
Anti-TRAP
DZR_2
HTH_Tnp_ISL3
DUF5817
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
AUG48141
UniProt:
A0A2H5A085
LinkDB
All DBs
Position
I:2289721..2290686
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AA seq
321 aa
AA seq
DB search
MSEHTRTRQQREEQTTESTESESTACPECSGSLVIDDEHGETVCEDCGLVVESDEIDRGP
EWRAFDSSEKDEKSRVGAPTTNMMHDKGLSTNIDWRDKDAYGNSLSGKQRQKMQRLRKWN
ERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDEDLLPGRSIEGVST
ASVYAAARQAGVPRSLDEITEVSRVEKSEIARTYRYVVRELSLEVRPADPESYVPRFASS
LELSDEAEHRARQLLQNAKEQGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVSEVADIS
EVTIRNRYHELLEAEQDLPVA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacacacacggacacgacagcaacgtgaagaacagacgacggagtcgacggaa
tcagagagcacggcgtgcccggagtgcagtggctcgctcgttatcgacgacgaacacggc
gaaacagtctgtgaggattgtggccttgtcgtcgagtctgacgagatcgaccgcggcccc
gagtggcgcgcgttcgactccagcgagaaagacgagaagtcccgcgtcggcgcaccgacg
acgaacatgatgcacgacaagggcctctcgaccaatatcgactggcgcgacaaggacgct
tacggtaactctctgtcgggtaaacagcgccagaagatgcagcgcctgcgcaagtggaac
gagcgctttagaacgcgggactccaaggaacgcaacctcaagcaggccctcggtgagatt
gaccggatggcttcggcactcggactcccggaaaacgtccgcgagacggccagcgtcatc
taccgccgcgcgctggacgaggacctcctgcccggccgctccatcgaaggtgtctcgacg
gcgtccgtctacgccgccgcgcgccaggccggtgtcccgcgctcgctcgacgagatcacg
gaggtctcccgggtcgagaaaagcgaaatcgcgcggacctaccgctacgtcgtccgcgaa
ctctcgctcgaagtccgtcctgccgaccccgagagctacgtcccgcgctttgcctcctcg
ctggaactgtccgacgaggccgaacaccgcgcccgtcagctcctccagaacgccaaggaa
cagggcgtccactccgggaagtcgccggtcggcctcgccgccgccgccgtctacgccgcc
gcactgctgaccaacgagaagacgacgcaagccgccgtctccgaggtcgccgacatctcc
gaggtcaccatccgcaaccgctaccacgagctgctggaagccgagcaggacctgcccgtc
gcgtaa
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