Haloarcula taiwanensis: BVU17_13405
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Entry
BVU17_13405 CDS
T05292
Name
(GenBank) replication factor A
KO
K07466
replication factor A1
Organism
hta
Haloarcula taiwanensis
Pathway
hta03030
DNA replication
hta03420
Nucleotide excision repair
hta03430
Mismatch repair
hta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BVU17_13405
03420 Nucleotide excision repair
BVU17_13405
03430 Mismatch repair
BVU17_13405
03440 Homologous recombination
BVU17_13405
03460 Fanconi anemia pathway
BVU17_13405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hta03000
]
BVU17_13405
03032 DNA replication proteins [BR:
hta03032
]
BVU17_13405
03400 DNA repair and recombination proteins [BR:
hta03400
]
BVU17_13405
Transcription factors [BR:
hta03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
BVU17_13405
DNA replication proteins [BR:
hta03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
BVU17_13405
DNA repair and recombination proteins [BR:
hta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
BVU17_13405
MMR (mismatch excision repair)
BVU17_13405
DSBR (double strand breaks repair)
HR (homologous recombination)
BVU17_13405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
OB_Ssb-like
SHLD2_OB1
Peptidase_inhib_put
Motif
Other DBs
NCBI-ProteinID:
AUG48473
UniProt:
A0A2H5A170
LinkDB
All DBs
Position
I:complement(2633036..2634499)
Genome browser
AA seq
487 aa
AA seq
DB search
MGAIEDIYEDLETDVPEEEFREAVEEKVEQMGGLADEETAAMLLAHELNENEVNAIADIE
PGMDEVKFLAKVMAIGDLKTFERDDEDEDGRVINVEAADESGSVRLAFWDGQAVDIDEGK
LEVGDVLRVKGRPKDGYNGLEVSVDKAEPDEDATIDVEPGAGSSIDALTMGQSDVTLRGL
VLDTDTIRTFDRDDGSEGRVSNLTLGDETGRIRVTLWDDRADRAEELDAGAAVEVVDGYV
RERDGSLELHVGDQGAVDEVDDDVTFEPDADPIAEVELEETVDIAGVVRSADPKRTFDRD
DGSEGQVRNVRIQDATGDIRVALWGDKADKDIAPGDEVLAADVEIQDGWQDDKEASASWN
STIVVLDDGADLATGGAGGGASVETTDAEHAGLSTFGEEADDADASSSDEAAAVSADSGD
TSPDGGAQSAGQQVEFTGTVVQTGDPVVLDDGEQTMSVETGERVQLGQEITVRGELRDGR
LHAEDVF
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgatagaggacatttacgaggacttagagacggacgtccccgaggaggagttc
cgcgaggccgtcgaggagaaggtcgagcagatgggcgggctcgccgacgaggagacggcc
gcgatgctgttggcccacgagcttaacgagaacgaggtcaacgccatcgccgatatcgaa
cccggaatggacgaggtcaaattcctcgccaaggtgatggctatcggcgacctgaagacc
ttcgaacgcgacgacgaggacgaagacggccgggtcatcaacgttgaggccgccgacgag
agcggcagcgtcaggctcgccttctgggacggccaggccgtcgatatcgacgagggaaag
ctggaggtcggcgacgtactccgggtgaagggtcggccgaaggacggctacaacgggctg
gaggtgtccgtcgacaaggcagagccggacgaggacgccacaatcgacgtggaaccgggc
gctggctcgtctatcgacgcgctgaccatggggcagtccgacgtgacgctgcgcgggctt
gtgctcgataccgacacgatacggacctttgaccgcgacgacggcagcgagggccgcgtc
tcgaacctcactctcggtgacgagacggggcgcatccgagtgacgctgtgggacgatcgc
gctgaccgtgccgaggaactcgatgctggcgcggctgtcgaagtcgtcgacggctacgtc
cgggagcgggacggctcactcgaactccacgtcggcgaccagggggccgtcgacgaagtg
gacgacgacgtgaccttcgagcccgacgccgacccgatagcggaggtcgaacttgaggag
acggttgacatcgctggcgtcgtccgctcggccgaccccaagcggacgttcgaccgcgac
gacggcagcgaggggcaggtccggaacgtccgcattcaggatgcgacaggtgacatccgc
gtggcgctgtggggcgacaaggcggacaaggacatcgcgccgggcgacgaggttctcgca
gccgatgtcgagattcaggacggctggcaggacgacaaggaagcgtcggcgagctggaac
tcgacgattgtcgtgctcgacgacggtgcggacttggcgacgggtggcgcaggcggggga
gccagcgtcgaaacgaccgacgccgaacacgccggtctgtcaactttcggcgaggaagcg
gacgatgctgacgccagcagcagtgacgaggcggccgctgtcagcgccgactccggcgac
acgtcgccggacggcggcgcacagagcgctggccagcaggtggagttcaccggcaccgtc
gtccagaccggcgacccggtcgtgctcgacgacggcgagcagacgatgagcgtcgaaacc
ggcgagcgcgtgcagttagggcaggagataaccgtccgtggcgaactccgcgatggccgc
ctccacgctgaggacgtgttctga
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