Hymenobacter tibetensis: MTX78_01705
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Entry
MTX78_01705 CDS
T08236
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
htb
Hymenobacter tibetensis
Pathway
htb03030
DNA replication
htb03410
Base excision repair
htb03420
Nucleotide excision repair
htb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
htb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MTX78_01705 (polA)
03410 Base excision repair
MTX78_01705 (polA)
03420 Nucleotide excision repair
MTX78_01705 (polA)
03440 Homologous recombination
MTX78_01705 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
htb03032
]
MTX78_01705 (polA)
03400 DNA repair and recombination proteins [BR:
htb03400
]
MTX78_01705 (polA)
Enzymes [BR:
htb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MTX78_01705 (polA)
DNA replication proteins [BR:
htb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MTX78_01705 (polA)
DNA repair and recombination proteins [BR:
htb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MTX78_01705 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MTX78_01705 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UOG75325
LinkDB
All DBs
Position
complement(428450..431347)
Genome browser
AA seq
965 aa
AA seq
DB search
MTDTAANQPHKLFLLDAFALIYRAHFAFSKNPRVNSKGLNTGAILGFTNTLVEVLQKEKP
THIGVAFDAQKKTFRHEQFAEYKAQRQAMPEDIGLAIPYIKKIIKAFNIPILVVDGFEAD
DVIGTLARRAEAQGFGEVFMMTPDKDYCQLVTDCVKIYRPAFMGNAAEILDVAHVLQRFE
IERPEQVIDILGLQGDASDNIPGIPGIGEKTAKTLIQKYGSVENLIANVDELKGKQQENV
RNFAEQGLLSKELATIHLDVPIEFEADKLVLDKPDEDQLRQLFDELEFRQLAARILGGGE
KAGGPATADDRANPRSSSRRPKVPASQASLFGNSSDAAVAIGAEEGETGSFGAPAGPRLT
LADVPHQYHLIDTPELRQSLLNFLLQQTEVSFDTETTGLDTMTARLVGLSFCWLPGEAYY
VPVPQDDHAAAQALIDEFRPFFDASGILKIGQNIKYDLTILRHYNVEVEGPLFDTMLAHY
LLEPDMRHNMDVLAETYLHYTPVAITSLIGNKGKNQKTMADLPPAEVSDYACEDADVTLQ
LKHVFEPMLKEVGLLDLLNEVENPLVPVLSAIEYEGVKIDSGAMGEYSAELQGYIQEIEQ
QIFAAAGQEFNIGSPKQLGEILFDKLGLGGGKIKKTKTGQYATGEEILSVLAADNPVAGL
ILEHRQLTKLRSTYVEALPQLVCELDGRVHTSFNQAVTATGRLSSTNPNLQNIPIRTEKG
REIRKAFVPRDENHVLLAADYSQVELRIMADFSGDKTMIEAFRLGQDIHTSTASKVFHVP
LDQVDGEMRRKAKTVNFGIIYGISAFGLAQRIGISRKEATEIIDTYFEEFSAVKKFMDES
INKARELEYATTLLGRRRYLRDINSRNATLRGYTERNAINAPIQGTAADIIKKAMINIHD
WLHDEKLATRMILQVHDELVFDAVKEEIDYITPKVKELMTTALLLPRGVPLEVEVGTGNN
WLQAH
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccgccgccaaccaaccccacaagcttttcctgctcgacgcgtttgccttg
atttaccgcgcccacttcgcgttcagcaagaacccgcgcgtcaattccaagggcctcaac
accggggctattttgggcttcactaacaccttggtagaggtgttgcaaaaagaaaaaccc
acccacatcggcgtggcattcgatgctcagaaaaagacgtttcgccacgagcagtttgcc
gaatacaaggcgcaacgccaagccatgcccgaagacattggcttggctattccgtatatc
aagaagattatcaaggccttcaatatcccgattctggtggtggatggctttgaagccgac
gacgtcattggcaccctggcgcgccgggccgaggcgcagggctttggcgaggtgttcatg
atgacgcccgacaaagactactgccagttggtaaccgactgcgtgaaaatctaccggccg
gcattcatgggcaatgcggccgaaatattggacgtggcgcacgtgctgcagcgcttcgag
attgagcggcccgagcaagtcatcgacatcttgggcttgcagggcgatgcctccgacaac
attcctggcattcccggcatcggggagaagacggccaagacgctgatccagaagtacggc
tcggtggagaacctgattgccaacgtggacgagctgaaaggcaaacagcaggaaaacgtg
cgcaacttcgccgagcaggggttgcttagcaaggaactggctaccatccatttggacgta
cccattgagttcgaagccgataagctggtgctcgacaaacccgacgaagaccagttgcgc
cagctgttcgacgagctggagttccggcagttggctgcgcgcattttgggtggcggtgaa
aaggccggtggcccagcaactgctgacgaccgcgccaacccacggtcaagctcgcggcgg
ccgaaagtacccgccagccaagccagcttgtttggcaacagttctgacgcggccgtagct
attggggctgaggaaggcgaaacaggcagcttcggtgcgcctgccggcccgcgcctcacc
ctcgccgacgtgccgcaccagtaccacctcatcgacacgcccgagttgcgccagtcgtta
cttaacttcctgcttcagcaaactgaggtcagcttcgataccgaaactacgggcctcgat
accatgacggcccggctggtgggtctctcgttttgctggctgccgggtgaggcctactac
gtgcccgttccgcaagacgaccacgccgccgcgcaagccttaattgacgagttccggcct
ttctttgatgcctcgggcatcctcaagatcggacaaaatatcaagtacgaccttaccata
ctgcgccactacaatgtggaagtggaagggccgctcttcgacaccatgctggcgcactac
ctgctggagcccgatatgcgccacaacatggacgtgctggctgaaacctacctgcactac
acgcccgttgccatcacctccctcatcggcaacaaaggcaaaaaccagaaaaccatggcc
gacctcccaccggccgaagtatccgactacgcctgcgaagacgccgacgtgaccttgcag
cttaagcacgtattcgagccgatgctgaaggaagtaggcttgctggatttgctgaacgag
gtggagaatccgttggtgccggtgctgtcggctattgagtacgagggtgtgaagattgac
tccggtgccatgggcgagtactcggcggagctgcaaggctacatccaagagatagagcag
cagattttcgcggcggccgggcaggagttcaatattggctcgccgaagcagcttggcgaa
attctgttcgacaagctcggactgggcggcggcaaaatcaagaaaaccaaaaccggccaa
tacgccaccggcgaggaaatcctgagtgtgctggccgccgacaaccccgtggccggcctg
attttggagcaccgccagctcactaaactacgctccacctacgtggaagctctgccccag
ttggtgtgtgagttggacggccgcgtgcataccagcttcaaccaggccgtaacagctacc
ggccgcctcagcagcaccaaccccaacctgcagaatatcccgattcgcaccgagaaaggc
cgcgaaatccgcaaagcctttgtgccgcgcgacgagaaccatgtgctgctagccgccgac
tactcgcaggtagagctccgcatcatggccgatttctcgggcgacaaaaccatgattgag
gcattccgactaggtcaagacattcataccagcaccgccagcaaggtgttccatgtgccc
ctcgaccaagtggatggcgagatgcgccgcaaagccaaaaccgtcaactttggtattatc
tacggcatttcggcgttcggtctggcccagcgcattggcatctcgcgcaaggaagccacc
gaaatcattgacacctatttcgaggagttttcggctgtgaagaagttcatggacgaaagc
atcaacaaggcgcgggagctggaatacgccaccacgttgctgggccgccgccgctatctg
cgcgacatcaactcgcgcaacgccaccctacgcggctacaccgagcgcaacgccatcaac
gcccccatccaaggcaccgccgccgacattatcaagaaggcaatgatcaacattcacgac
tggctgcacgacgaaaagctagccacgcggatgatcttgcaggtgcatgacgaactggta
ttcgatgccgtgaaagaggaaatcgactacatcacgcccaaagtgaaggagttgatgacc
acggccctgctcctaccccgcggcgtgccactggaagtggaagtaggcaccggcaacaat
tggctgcaagcgcactag
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