Hymenobacter tibetensis: MTX78_07645
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Entry
MTX78_07645 CDS
T08236
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
htb
Hymenobacter tibetensis
Pathway
htb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTX78_07645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htb03019
]
MTX78_07645
03400 DNA repair and recombination proteins [BR:
htb03400
]
MTX78_07645
Enzymes [BR:
htb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MTX78_07645
Messenger RNA biogenesis [BR:
htb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MTX78_07645
DNA repair and recombination proteins [BR:
htb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MTX78_07645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
TFIIE_alpha
Motif
Other DBs
NCBI-ProteinID:
UOG76463
LinkDB
All DBs
Position
1923167..1925086
Genome browser
AA seq
639 aa
AA seq
DB search
MTLPTDDILHVLHQTWGHTAFRPLQEDIIRAVLAGQDVLALLPTGGGKSICFQVPALARD
GLCLVVSPLIALMKDQVENLRKRGIKAEAVYAGMSHQEIDQTLDNCVYGPVKFLYVSPER
LLTDMFRARIGKMKVSLLAVDEAHCLSQWGYDFRPPYLRIAELREVLPSVPCIALTATAT
EKVRQDIIQELRFRPGHKVFQQSFARPNLSYSVLATEDKLRRLLEVIRGVGAGKTSIVYA
RTRRQTEETTAYLQQHGVRATAYHAGLPSEQRTRTQQDWMQNKVHCIVATNAFGMGIDKP
DVRLVVHLEAPDNLEAYYQEAGRAGRDEKYAFAVLLVGPNDADELRRRTQQAHPPLDTVR
RVYQALANFSRTAVGGGELVAFDFDIQQFAETYRIKALDAHNSMRTLAREAFVVLNEAVN
DPARVHIPIDHTDLYRFQVANAQHDQLIKSLLRFHGGELFAGFQRISENSLAQHLKLSVV
DLRKMLLFLHRSGIIQYQPRHDSPQAQFATPRYDADKLPLDQKRLTATRELAHKKTEAVI
RYAAGGRCRQQLLLEYFGELDAPACRVCDFCLAQKKAKQEAVPSVALREQLLALLRTTPQ
TPREVLAHFNPGQASTVTEQLRELVELGELRYASDGRLS
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
ttgaccttgcctaccgacgatattctgcacgtactgcatcagacgtggggacatactgct
tttcggccgttgcaggaggacattatccgggcggtgctagcggggcaggatgtactggcg
ctattgccgaccggtggtggaaagagcatttgttttcaggtacctgccctggcacgagac
gggttgtgcttggtggtgtcgcccctgattgcgctgatgaaggatcaggtggagaacctg
cgcaagcggggtatcaaggccgaagcggtgtatgcggggatgagccaccaagaaatcgac
caaacgctggacaactgcgtgtatggccccgtcaagttcctgtacgtgtcgccggagcgt
ctgctaacggatatgtttcgggcacggattgggaagatgaaggtgagtttgctggctgtg
gatgaggcgcattgcctttcacagtggggctacgatttccggccgccgtatctgcgcata
gcggagctgcgagaagtgctgcctagtgtgccctgcatcgccctcacagctacagctacc
gaaaaggtgcgccaggatatcatacaagagttacggttccggcccggacacaaggtattt
cagcaaagttttgctcggcccaacctatcctattcagtgctggccactgaagacaaactg
cgccggctgttggaagtgatacggggggtaggggccggcaaaaccagcattgtgtatgcc
cgtacccgccggcaaactgaagagaccactgcgtatctgcaacagcatggcgtgcgagct
acagcctaccatgccggcttgcccagcgagcagcgcactcgtacccagcaagactggatg
caaaacaaagtccactgcatagtggccaccaatgcgttcggtatgggcatagataagccc
gacgtccggctggtagtgcatttagaagctcccgacaaccttgaggcatactaccaggaa
gcaggccgggctggccgcgacgagaagtacgcctttgccgtgctcctcgtcggaccaaat
gatgccgatgagttgcgccgccgtacacagcaggcccatccgcccctcgatacggtgcgc
cgggtgtatcaagcgttggctaacttttctcgcacagcggtggggggcggcgagttggtc
gcttttgattttgatattcagcaattcgctgagacgtaccgaattaaagcactggatgcg
cacaacagcatgcgtacgctggcacgtgaagcatttgtggttctgaacgaagccgtaaac
gatccggcccgcgtgcatattcccatagaccataccgatttgtatcggtttcaggtagcc
aatgcccagcacgaccagctaattaaaagtttgctgcgctttcatgggggagagctgttt
gcggggtttcagcggatttccgagaacagcttggcgcaacacttaaagctcagcgtagtg
gacctgcgcaaaatgctgttgtttctacaccgctccggcattattcagtaccagcctcgg
cacgactccccccaagcccagttcgccacgccccgctacgacgccgacaagctgccgctc
gaccaaaagcgcctaaccgcaacccgagaactagctcacaagaaaacagaagcggtaatc
cgctacgccgccggaggacgctgccggcagcaactcttgctggagtacttcggtgagctg
gatgcgcctgcttgccgggtctgtgatttttgcttagcgcagaagaaggccaagcaagag
gcagtgccatccgtggcgctccgcgaacagttgttggctttgctccgtaccaccccacaa
actccgcgtgaggtcttggcacatttcaaccccggccaagccagtacggttaccgagcag
ctgcgggaactggtggaattaggtgagctacgctatgcttccgacggccgattaagctaa
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