Hymenobacter tibetensis: MTX78_10855
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Entry
MTX78_10855 CDS
T08236
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
htb
Hymenobacter tibetensis
Pathway
htb03030
DNA replication
htb03430
Mismatch repair
htb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
htb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MTX78_10855
03430 Mismatch repair
MTX78_10855
03440 Homologous recombination
MTX78_10855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
htb03032
]
MTX78_10855
03400 DNA repair and recombination proteins [BR:
htb03400
]
MTX78_10855
Enzymes [BR:
htb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MTX78_10855
DNA replication proteins [BR:
htb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MTX78_10855
DNA repair and recombination proteins [BR:
htb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MTX78_10855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
DNA_pol_A_exo1
RNase_H_2
DUF7508
Motif
Other DBs
NCBI-ProteinID:
UOG77081
LinkDB
All DBs
Position
complement(2713227..2714747)
Genome browser
AA seq
506 aa
AA seq
DB search
MYAIIDLETTGGQPTQDRITEIAIFIHDGEKVVDQYETLLNPGRSIPYFITQLTGINDDM
VRDAPKFHEVARKVVEMTEGCVFVAHNVRFDYSFLKKEFADLGYNYSRKTLCTVRLSRSL
MPGQPSYSLGKLCQNIGIPLNGRHRAAGDAAATAILFDRLLKISQQNEALRDSSISAADT
LAAVDATAPSGRRPTVAPAETAVVTRPPSARKMKAVQEAIRTALLPVNITPAKVATLPHE
AGVYYFHNEEGEVIYVGKSINIYKRIQQHFAIDYKSRKSIEFKNSISDITWELTGSELVA
LLYESHEIKRLKPLYNRAQRRSVFPAGIFLRTDEQGYKHLYYGRADDHAESHPLIALGNQ
YKAKGFLFHKVAKFNLCQKLCDLYKTTGSCFDYQVHRCKGACIGLEPPEEYNLRVEQAIE
SFTYEHGSFVVIGKGRTELEKTVVLVENGRYLGFAYVDEYFSARTLADFKAVITRYNDNK
DVQQIIRQYLRTKHKDKVKLFKPTAS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgccatcatcgaccttgaaaccaccggaggccagcccacgcaggaccgcattacc
gaaatagccatctttattcatgatggggaaaaggtagtggaccagtacgaaacgctgttg
aatccggggcggtccatcccctatttcattactcagcttaccggcatcaacgatgacatg
gtgcgcgacgcgcccaagttccatgaggtggcgcgcaaggtggtggagatgaccgaaggt
tgcgtgtttgtggcgcacaacgtgcggttcgactatagctttctgaaaaaggagtttgct
gatctaggctacaactactcgcgcaagacgctttgcacggtgcgtttgagccgctccttg
atgccaggccaaccaagttacagcttaggcaagctttgccagaacatcgggattccgctc
aatggccgccaccgcgcggccggcgacgccgctgctactgccattctcttcgaccggctt
ctaaaaatcagccaacaaaacgaggccctgcgcgactcctctatttccgcagccgatacg
ctggccgcagtggatgctactgcgcctagtgggcgccgccctactgttgcgccagccgaa
acggcagtggttactcggccgccttccgctcgcaagatgaaagcggtgcaggaagctatc
cggacggcgctgcttcccgtcaatattacgccggccaaagtggccacgctgccgcatgag
gcgggcgtgtactacttccacaacgaggagggcgaggtgatttacgttgggaaaagcatc
aacatctacaagcggattcaacagcactttgccatcgactacaagtcgcgcaagagtatc
gagttcaagaactctatttccgatatcacctgggaattaacgggttcggaactggtggcg
ctgctgtatgaatcgcacgaaatcaagcgcctaaaaccgctttacaaccgggctcagcgg
cgttccgtgtttccggcgggtattttcctccgaacggacgaacaaggctacaagcacctc
tactacggtcgcgccgacgaccatgctgaatcgcacccgctaattgcgctcggcaaccag
tacaaggccaaaggattcctgttccataaggtggccaaattcaacctgtgccaaaagctc
tgcgacttatacaaaaccaccggctcgtgctttgattatcaagtgcaccgctgtaaaggc
gcctgcattggcctggagccgcccgaggaatacaacctccgtgtggagcaggctattgag
tcatttacgtacgaacacggctcgtttgtggtgataggcaaaggacgcaccgaactagag
aaaactgtagtgctcgtggagaacggacgctacttgggctttgcttacgtagacgagtac
ttttctgcacgcacgttagccgatttcaaggccgttatcacgcgttacaacgacaacaag
gacgtgcagcagattatcaggcaatacttacggaccaagcacaaagacaaagtgaagctc
tttaagcctactgcatcctga
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