Hymenobacter tibetensis: MTX78_18130
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Entry
MTX78_18130 CDS
T08236
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
htb
Hymenobacter tibetensis
Pathway
htb03030
DNA replication
htb03430
Mismatch repair
htb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
htb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MTX78_18130 (dnaE)
03430 Mismatch repair
MTX78_18130 (dnaE)
03440 Homologous recombination
MTX78_18130 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
htb03032
]
MTX78_18130 (dnaE)
03400 DNA repair and recombination proteins [BR:
htb03400
]
MTX78_18130 (dnaE)
Enzymes [BR:
htb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MTX78_18130 (dnaE)
DNA replication proteins [BR:
htb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MTX78_18130 (dnaE)
DNA repair and recombination proteins [BR:
htb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MTX78_18130 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
UOG74028
LinkDB
All DBs
Position
4524600..4528283
Genome browser
AA seq
1227 aa
AA seq
DB search
MAVFSHLHSHTQYSLLDGQASISALMKKAQADGMPAVALTDHGNMFGAFNFVAEANKYNV
KPIVGCEFYMVEDRHKKAFSREKGERDKRYHQLLLAKDQAGYHNLSKLCSMSFIEGVYSK
FPRIDKEILLKYHEGLIATSCCIGAEIPQAILFESEAKAEELLKWWLDVFEDDYYIEIQR
HGLMNFDGTGKSQEDVNQVLLSLAKKYNVKVICTNDSHYVDQTDFAPHDILLCVNTGEEH
SIPVGDFQTQYFRLISQDNKVHYDHLDNLRHLSAQDATIRRQLQRIDEEAQGPKPRARFG
FANDQFYFKTQAEMNALFADVPESLDNTNEIVDKITPPKLQRDILLPNFPLPAEHPTADA
FLRYLTFKGAFEGEKRRYSERTPEIEERLDYELRVIETMGFAGYFLITQDFINHGRNIGV
AVGPGRGSAAGSAVAYCIGITNIDPIKYSLLFERFLNPERVSMPDIDIDFDDVNRQKVID
YVVDKYGKTQVAQIITFGTMAAKSSIKDVSRAMDLALPLANDLVKMVPDQVGTTLAKAFA
ENQELDMIRRDDAPDNLRGHILRLAEKLEGSVRNTGIHAAGVIIAPDDITKYIPVSTSKD
SDLLVTQFDGKVIESAGMLKMDFLGLKTLTIIVDAINLIEQNHGVKIDIDAIPIDDQKTY
ELYQRGDTIGTFQFESEGMRMYLKDLKPTNIEDLIAMNALYRPGPMQFIPNFINRKHGRE
PVEYPHELLEPILNYSQGIMVYQEQIMQTAQILAGYSLGGADLLRRAMGKKDMKKMALER
EKFTEGAEKLHGIKAKKANEVFDVMEKFAAYGFNRSHSAAYSVVAYQTGYLKAHYPAEYM
AAVLTNNMGDIKKVTFFIEEARKQGVAVLGPDVNESILKFNVNKQGQIRFGMAAVKGAGE
AAVEEIVTERTKNGPYADIFDFSRRVNLRAVNKKTFESMAQAGAFDSFERYHRRQYIEAL
SGDQNVIEKAMKVGQQHQAAKESAQQSLFGGGGDMMAIPMPKIQDMELWSPTEKLRREKE
VVGFYLSGHPLDDFKLEIDSYCTCGLDKIENYKNRDISVAGLISNVLFKTTKTGHPFVSF
NVEDYESSLNLALFRDDYSKFSPLINPRNYDKEQVPPMFIRGKFQQRFRDSDQFEFKIMT
MEPLFHVAEKLSNGVRVQLDLRTITEPFMDRFMAAVEESQGSKKLEIKFAEPHEHLAVDT
YSRRYRIEPKAFIARMREMEIDACQLI
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggccgttttctcgcacctgcattcccacacccaatattctcttcttgatggccaggcc
agcatcagcgccctgatgaaaaaggcgcaggccgatggcatgcccgccgttgccctcacc
gaccacggcaacatgttcggagccttcaacttcgtagcagaagccaacaagtacaacgtc
aagccaattgtgggctgcgagttctacatggtagaagaccgccacaagaaggccttcagc
cgcgaaaaaggcgaacgtgacaaacgctaccaccagctgctattagccaaagaccaagcc
ggctaccataacctgagcaagctttgctcgatgagttttatcgaaggcgtgtactccaag
ttcccgcgtatcgacaaagagattctgctcaagtatcacgagggcctgattgctacgtcg
tgttgcattggcgctgaaattccgcaggccattctgtttgagagtgaggccaaggccgaa
gagctgctgaaatggtggctggacgtgttcgaggacgattactatatcgagattcagcgg
cacgggctgatgaatttcgatggcaccggcaagagccaggaagacgtaaaccaagtgctg
ctgagcctggccaagaagtataacgtgaaggtgatttgcaccaatgactcgcactacgtc
gaccaaaccgacttcgcgccgcacgacattttgctgtgcgtgaataccggcgaggagcac
agcattccggttggcgacttccaaacgcagtatttccgtctgatttcgcaggacaacaaa
gttcactacgaccacctcgacaacctgcgtcatttgtcggcgcaggatgctaccatccgt
cgccagcttcagcgcatcgacgaggaagcccagggacccaagcctcgggcccgcttcggt
ttcgccaacgaccagttctacttcaagacccaggcggagatgaacgccctcttcgccgac
gtgccggagagcttagacaacaccaacgaaattgtagataaaatcacgccgcccaagctg
cagcgcgatattttgctccccaactttccgctcccggccgaacaccccactgccgacgcg
ttcctacgttacctcacgttcaagggcgctttcgagggcgaaaaacgccgctactccgag
cgcacgcccgaaatcgaggagcggctggactacgaactgcgcgtgattgagacgatgggc
tttgcgggctacttcctcatcacccaagacttcatcaaccacggccgcaacattggcgtg
gccgtagggccgggccggggctcggcggccggttcggcagtggcctactgcattggtatc
accaacattgaccccatcaagtactcgctgctgttcgagcgtttcttgaatccggagcgc
gtgtccatgcccgatattgatatcgacttcgacgacgtgaaccgtcagaaagtcatcgac
tacgtggtggacaagtacggtaaaacgcaggtcgctcagattattaccttcggtaccatg
gcggccaaatcgtctatcaaggacgtgtcgcgggccatggatctggccttgccgctggcc
aacgacctggtgaaaatggtgcccgaccaagtgggtactacactagccaaagcgtttgcc
gaaaaccaggaactggatatgatccggcgcgacgatgcgcccgacaacctgcgcggccat
atcctgcgcctcgccgagaagctggaaggctcagtccgcaacaccggcatccacgccgcc
ggcgtcatcattgcccccgacgacatcaccaagtacattcccgtttccacctccaaggat
tcggacctgctggttacgcagtttgatggcaaggtgattgagagtgccgggatgctcaag
atggacttcctgggcttgaagacgttgactattatcgtcgatgccatcaacctaattgag
cagaaccacggcgttaaaatcgacatcgacgctattccaattgacgaccagaaaacctac
gagctctaccagcgcggcgacaccatcggcacgttccagtttgaatccgagggtatgcgc
atgtacctcaaggacctcaagcccaccaacatcgaggacctgattgccatgaacgccctg
taccggccgggcccgatgcagttcatcccgaacttcatcaaccgcaagcacggccgcgaa
ccggtagagtacccgcacgagttgttagagcccatcctgaactactcgcagggcatcatg
gtgtaccaggagcagatcatgcaaacggcccagattctggccggttactcgctcggcggc
gccgacttgctgcgccgcgccatgggtaagaaggacatgaaaaagatggctctggaacgt
gagaaattcacggaaggcgccgagaagctacacggtatcaaggccaagaaagccaacgag
gtgttcgacgtgatggaaaagtttgcggcctacggcttcaaccgctcccactccgccgct
tactcggtggtggcttaccagaccggctacctcaaggcccactaccctgccgagtacatg
gccgccgtgctcaccaacaacatgggcgacatcaagaaggtgacgttcttcatcgaggaa
gctcgcaagcaaggtgtagccgtactcggtcccgacgtcaacgaatctatcttgaagttc
aacgtgaacaagcagggccagattcgttttgggatggctgccgtgaagggtgccggcgaa
gctgccgtggaagaaattgtgacggagcgtaccaagaacggtccgtacgccgacattttc
gacttctcgcgccgcgtgaacctgcgggccgtgaacaagaaaacgtttgaaagcatggcc
caggccggtgccttcgactcgttcgagcgctaccaccgccgccagtacatcgaggcgctg
agtggtgaccagaacgtcattgagaaggccatgaaagtgggccagcagcaccaagcagct
aaagaatcggcccagcagagcctattcggaggcggcggcgacatgatggctattcccatg
cccaagattcaggacatggagctgtggagccccaccgagaagctgcgccgtgaaaaggaa
gtggtaggcttctacctgtccggtcacccgctcgacgacttcaagctggaaatcgactcg
tactgcacgtgcggcctcgacaaaattgagaactacaagaaccgcgacatatcggtggct
gggctgatttccaatgtgttgttcaaaaccaccaagaccggccaccccttcgtgagcttc
aacgtggaagactacgaatcaagtttgaacctggccttgttccgcgacgactactcgaag
ttctccccgctcatcaacccccgcaactacgacaaagagcaggtgccgcctatgttcatc
cgcggcaagttccagcagcgtttccgcgactccgatcagttcgagttcaagatcatgacc
atggagccgctgttccacgtggccgagaagctctccaatggcgtgcgggtgcagctcgat
ctgcgcaccatcaccgagcccttcatggaccggttcatggccgcggtagaggaaagccag
ggcagcaaaaagctggaaatcaagtttgcggagccccacgaacacttggccgtggacact
tattcgcgtcgctaccgcatcgagccgaaagcgttcattgcccggatgcgggaaatggaa
attgacgcctgccagctgatttaa
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integrated database retrieval system
