Hymenobacter tibetensis: MTX78_18435
Help
Entry
MTX78_18435 CDS
T08236
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
htb
Hymenobacter tibetensis
Pathway
htb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTX78_18435 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htb03019
]
MTX78_18435 (recQ)
03400 DNA repair and recombination proteins [BR:
htb03400
]
MTX78_18435 (recQ)
Enzymes [BR:
htb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MTX78_18435 (recQ)
Messenger RNA biogenesis [BR:
htb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MTX78_18435 (recQ)
DNA repair and recombination proteins [BR:
htb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MTX78_18435 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
RecQ-1-like_HTH
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
UOG74087
LinkDB
All DBs
Position
4606201..4608387
Genome browser
AA seq
728 aa
AA seq
DB search
MNNAISQGADLKGKLKEVFGYGQFRGTQEAIIQNVIEGHNTFVIMPTGAGKSLCYQLPAL
VLPGTAIVISPLIALMKNQVDQLNAFGVNAQFLNSTLTKAEMNRVKKDVISGEVKLLYVA
PESLTKDETIDFLQKATISFVAIDEAHCISEWGHDFRPEYRRIRGIIDNIGQVPIIALTA
TATPKVQLDIQKNLQMDDASVFKTSFNRTNLYYEVRPKHNTKKQLIQYVKQRKGLAGIIY
CLSRKKVEEIAELLKVNDVRALPYHAGLDPHIRMANQDAFLSEDCDVIVATIAFGMGIDK
PDVRFVIHYDTPKSIEGYYQETGRGGRDGLDGDCLMFYSYDDIVKLEKFNKDKPVTERDN
SKLLLQEMANYADSAVCRRKQLLHYFGEHFEKDCGFCDNCKHPKERFEAQQEVLLALKAV
VQTEQRFGIDHIGTVLMGMNNAHVESYGHNGLPIYGQGKDHDAQYWHSLLRQCLIFGFLE
KDIENFGVVKISDKGMDFIENPHSIKLTKDHDYDEEVKEEQEQEEVQQAAGHDETLFEML
KALRKKMAKEKELPPYVLFQDPSLKEMATTFPTKLDELAHVGGVGQGKAQKFGSPFLALI
KKYVEENDIMTASDVVVKSAVNKSKIKIYIIQQIDKKMDLEEIASSKGIDMRELMEEIEH
ICYSGTKLNLDYYINGILDEERQEEIYDYFMTASTDNIAVALKELGTDDYTEEDLRLMRI
KFLSEVAN
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaatgcaatcagccaaggtgctgatttgaaaggcaagttaaaggaagtttttggg
tacggtcagttccgcggcacgcaggaggccatcatccagaacgttatcgaggggcataat
acgttcgttattatgccgacaggtgctggtaaaagcctttgctatcaattacctgccctc
gtactgcctggcacagccattgtcatctctccacttattgccctgatgaaaaatcaggtc
gaccagctcaacgccttcggggtaaacgcacagtttctgaactcgactctgaccaaggcc
gagatgaaccgggtgaaaaaagacgttatcagcggcgaagtgaagctgctctacgttgct
cccgaaagcctgaccaaagacgaaaccatcgatttcctgcaaaaggcaaccatttctttt
gtcgctattgatgaggcgcactgtatttcagaatggggccacgacttccgccccgagtat
cgtcggattcgtggcatcatcgacaacattgggcaggtacctatcattgctctgacggcc
accgctacgcctaaggtgcagctggatattcagaagaacctgcagatggacgacgccagc
gttttcaaaacgtcgttcaaccgtaccaacctctactacgaagttcgccctaagcacaac
accaagaagcaactgattcagtatgtgaaacagcgcaaggggttggcaggcattatttat
tgcttgagccgcaagaaggtagaagaaattgccgagttgctgaaggtgaacgatgtgcgg
gccctaccttaccacgcaggcttggatccgcacatacgcatggccaaccaagacgccttt
ctgagcgaagactgcgacgttattgtggcaaccattgccttcggcatgggtatcgacaag
cccgatgtacgctttgttattcactatgacaccccgaaaagcattgagggctactaccag
gaaaccggccgcggcggccgcgacggtctcgacggcgactgcctgatgttctatagctac
gacgacatcgtaaagctagagaagttcaacaaagacaagcccgtaaccgagcgcgacaac
agcaagttgctcctccaggaaatggccaactacgccgattcggcggtgtgccggcgcaag
cagttgctgcactacttcggcgagcatttcgagaaagactgcggcttctgcgacaactgc
aaacacccgaaagagcggtttgaagcccaacaagaggtattgctggccctcaaagcagtt
gttcaaaccgagcagcgcttcggtatcgaccacatcgggaccgtgcttatgggcatgaac
aatgcgcacgttgaaagctacggccacaacgggttacccatctacgggcaaggcaaagac
cacgatgcacaatattggcattcgttgttgcgccagtgcttgatttttggtttcttagag
aaggatattgaaaactttggcgttgtaaaaatctccgacaagggtatggacttcatcgag
aatccccattcaattaagctcaccaaggaccacgactacgacgaggaggtcaaggaagag
caggagcaggaagaggtgcagcaagccgctggccacgacgaaaccctgttcgagatgctg
aaggcgctgcggaagaaaatggccaaggaaaaggaactacctccgtacgttcttttccag
gacccatcgctgaaagaaatggccactacattccccaccaagctcgatgagctagcgcat
gtgggcggtgtaggccaaggaaaagcccagaaatttggctcaccctttttggcgcttatc
aagaagtatgtcgaggaaaacgacatcatgacggcctccgacgtggtggtgaaatcggct
gtcaacaagtcgaaaatcaagatttacatcatccagcagatcgacaaaaagatggaccta
gaggaaattgcttcctctaagggcatcgacatgcgcgagctgatggaagaaatcgagcac
atctgctattccggcaccaagctcaacctcgactactacatcaacggtatcttggacgaa
gagcgccaagaggaaatctacgattacttcatgacggccagcaccgacaatattgcggtg
gcccttaaagagctaggcaccgatgactacaccgaagaagatctgcgcctgatgcgtatc
aagttcctaagcgaagtagccaactag
DBGET
integrated database retrieval system
