Hymenobacter tibetensis: MTX78_19345
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Entry
MTX78_19345 CDS
T08236
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
htb
Hymenobacter tibetensis
Pathway
htb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
htb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MTX78_19345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
htb03021
]
MTX78_19345
03400 DNA repair and recombination proteins [BR:
htb03400
]
MTX78_19345
Enzymes [BR:
htb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MTX78_19345
Transcription machinery [BR:
htb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MTX78_19345
DNA repair and recombination proteins [BR:
htb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MTX78_19345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
UOG74265
LinkDB
All DBs
Position
complement(4826668..4827657)
Genome browser
AA seq
329 aa
AA seq
DB search
MSILAFQMPEKVVMEKSDDFYGTFEFKPLEKGYGVTIGNALRRILLSSLEGYAITSVRTS
SVLHEFMTIEGVIEDMSEIILNLKQVRFKKVSDAIEDKITVRIKGQETFTAGDINKFTNG
FEVLNTDLVICHIDPSVELEFEFSIQKGRGYVPAEENKPADQVFGQIAIDAIFTPIKNVK
YSIENTRVEQKTDYEKLLIEIHTDGSIHPEEALKGAANILIQHFMLFSDSTMTFETAKAE
EEETVDEETLHMRKVLKTPLADMDLSVRAYNCLKAADIKTLGDLVQLDMSDMMKFRNFGK
KSLTELENLVEEKGLNFGMDLSKYKLDEE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcttagcttttcaaatgccggagaaggtagtaatggagaaatccgacgacttc
tacgggacgtttgaatttaaaccgctggagaaaggctacggcgtcacgatcggcaacgcg
ttacgccgtatcctgctgtcgtcgctggagggctatgccatcacgtcggttcgcaccagc
agcgttctgcacgagttcatgaccattgagggtgtgattgaggacatgtccgaaatcatc
ctcaacttgaagcaagtgcgcttcaaaaaggttagtgatgctatcgaggataaaatcacc
gttcgcatcaaaggccaagaaacattcactgctggtgacatcaataagttcaccaacggt
ttcgaggttttgaataccgacctcgttatctgtcacatcgacccttcggtagagctggag
tttgagttttctattcagaaagggcgtggttacgtgcctgctgaagagaacaagccagct
gaccaggtatttgggcagattgcaattgatgctatttttacgcctatcaaaaacgtaaaa
tatagcatcgagaatactcgtgtagaacagaaaaccgactacgagaagcttcttatagaa
attcacacggacggttctattcacccagaggaagcactgaaaggtgctgccaacattttg
atccaacacttcatgctgttctcggacagcaccatgaccttcgaaacggccaaggctgaa
gaagaagagactgtggacgaagaaacgctgcacatgcgtaaggttctgaagacgccactg
gcggatatggatctgagtgtacgcgcttacaactgcctcaaggctgccgacattaagacc
cttggtgacctagtgcagttggatatgtcggacatgatgaagttccgcaactttggtaaa
aagtcgctaactgagctggaaaacctcgtagaggaaaaaggcttgaacttcggcatggat
ttgagcaagtataagctcgacgaagaataa
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