Hymenobacter tibetensis: MTX78_23435
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Entry
MTX78_23435 CDS
T08236
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
htb
Hymenobacter tibetensis
Pathway
htb03420
Nucleotide excision repair
htb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
htb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MTX78_23435
03430 Mismatch repair
MTX78_23435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
htb03400
]
MTX78_23435
Enzymes [BR:
htb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MTX78_23435
DNA repair and recombination proteins [BR:
htb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MTX78_23435
MMR (mismatch excision repair)
Other MMR factors
MTX78_23435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
Viral_helicase1
UvrD_C_2
AAA_19
DEAD
SLFN-g3_helicase
AAA_16
NACHT
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UOG77302
LinkDB
All DBs
Position
unnamed1:89205..91256
Genome browser
AA seq
683 aa
AA seq
DB search
MNATEQDEREYLEEIKEQLTLAIKRVDDSVKQFSDELRQKKQYIHEHQSGMDDADMVAAG
QSINRMAFTGEAAVARKRKLLKLGQSPYFGRIDFVGQNQVASPVYIGIYSFLDERQRQNL
IYDWRAPISSMFYDFELGEASYLTPSGTIKGRIDLKRQYKIRDGRMEFMIENGVNIHDDV
LQRELAKSSDDKMKNIVATIQRDQNAVIRNETAPVMVIQGVAGSGKTSIALHRIAFLLYR
YRETIAAKDILIISPNKVFADYISNVLPELGEEHIPEMGMEELATDLLEGRYQFQTFFEQ
VSALLTEHNPAFIERIQFKSSFDFLSKLNQYLIYIENNYFVVNDLRVGRTVVPASFLLTK
LKAYHRVPILKRFALVADDVRAYVRDAAGRKLTGHEKATIGEAIPRMFKFNQVLDLYRDF
YRWIGRPELCKIDQRLRLEYADVFALIYLRIRLEGITAYEHVKHLLIDEMQDYTPVHYAV
LSRLFLCRKTILGDVNQTVNPYSASSAETIERVFPQADVVKLYRSYRSTVEITAFAQRIT
PNPDIIALERHGREPEVLSYNSRHEEIEAIQQMVAVFQRSGSNSLGIICKTLRQAEDVYQ
ALQAPGVQLLTEDSTSFKEGVIITTAHLAKGLEFDEVIVPFASARTYKTDVDKSMLYVAC
TRAMHQLTLTYSGTVTECLSAKN
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaacagagcaagacgaacgagaatacctggaagaaatcaaggagcaactcacc
ctggccatcaaacgggtggacgactctgtcaagcagttttccgacgaactccggcagaaa
aagcagtacatccacgagcaccagtcgggcatggacgatgccgatatggtggcggccggc
cagtccattaaccgcatggctttcacgggtgaagctgccgttgccagaaagcgcaaactc
ctgaagctaggccagtcgccttacttcggccgcattgatttcgtcggccaaaaccaggtg
gcctccccggtgtacatcgggatatattcgtttttggacgagcggcagcgccaaaacctg
atctacgattggcgcgcgcccatctcctctatgttctacgatttcgagctgggggaagcg
tcttacctcactccatccggtaccatcaagggccgcatcgacctgaagcggcagtacaaa
atccgggacggccgcatggagttcatgattgaaaacggcgtgaacattcacgacgacgtg
ctgcaacgcgaactagccaagtcgtcggacgacaagatgaagaacatcgtcgcgaccatc
cagcgcgaccaaaacgcggtgattcgcaacgagacggccccggtcatggtcattcaggga
gtggcgggttcgggcaaaacgtctattgccttgcaccgaatcgccttcctgctgtaccgc
taccgcgaaaccattgcggcgaaggacattcttatcatttctcccaacaaagtcttcgcc
gactatatctcgaacgtcttgcccgagctaggggaagagcacatcccggagatgggcatg
gaagagctggccaccgacttgctcgaaggccggtaccagtttcagacctttttcgagcag
gtatctgcattgctgacggagcacaaccccgcattcattgagcggattcaattcaagtcc
tcgtttgacttcctaagcaagctcaatcagtaccttatctacatcgagaacaactacttc
gttgtcaacgacctgcgggtggggcggaccgtggtgcccgcctcgttcctgctgaccaag
ctcaaggcctaccaccgggtaccaattttgaaaagattcgcgctggtggccgatgacgtg
cgggcttacgtgcgcgacgccgccggccggaagctcaccgggcacgaaaaagcaaccatc
ggggaagctattccgcgcatgttcaagttcaaccaagtactggacctctaccgggatttc
taccgctggatcggccggccggagctgtgcaaaatcgaccagcgcctgcgcttggaatac
gccgatgtgtttgccttgatttacctgcgcatacgcctggaaggcatcacggcctacgag
cacgtaaagcacttgctcattgacgagatgcaggattacacgccggtgcactacgccgtt
ttgtcgcggctgtttctgtgccgcaagaccattttgggcgacgtaaaccagacggtgaac
ccatacagcgcctcctcggccgagacaattgaacgcgtatttccgcaagccgacgtcgtg
aagctgtaccgcagctaccgctccaccgttgaaattacagccttcgcgcagcggatcacg
ccaaaccccgacatcattgcgctggaaaggcacggccgcgagccagaggtactgagctac
aacagccgccacgaggaaatcgaggccattcagcagatggttgccgtgttccaacgctca
ggaagcaattcgttgggtatcatctgcaaaacgctccggcaagccgaagacgtgtatcag
gccctacaagcccccggcgtgcagctgctcacggaagattccacgtccttcaaagaaggc
gttatcatcaccacggctcatttggcgaaggggctggaatttgatgaggtgattgtgccc
tttgcctccgctcgtacttacaaaacggacgtggacaagagcatgctgtacgtagcctgc
acccgagccatgcaccaactcaccttgacgtattcgggtacggttacggagtgcttgtct
gctaaaaactag
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