Halichoeres trimaculatus (threespot wrasse): 141784313
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Entry
141784313 CDS
T11192
Symbol
synpo2a
Name
(RefSeq) uncharacterized protein synpo2a isoform X1
KO
K24066
synaptopodin-2
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141784313 (synpo2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
htc04990
]
141784313 (synpo2a)
Domain-containing proteins not elsewhere classified [BR:
htc04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
141784313 (synpo2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
141784313
NCBI-ProteinID:
XP_074518224
LinkDB
All DBs
Position
Unknown
AA seq
1582 aa
AA seq
DB search
MGIGDYICVTLRGGAPWGFTLREGEGDTYRPLIVTQVEEDGRAFLAGVRNDDEAVSLNGE
PCADLTLLQALELIDTSVDCLQLLVKRYSAIPSDDNESEETSCSERDSSGEVLESTTLHI
VSSKHKDLRIPESKDDAYNVDLDIEFPDRPQLLCTELHTPSCEDQKAQVENDGGTRRCLS
PGDVVELQVSLSEQTLDDIGCTSLGCALGIEGGLSKREAIFTIPATTTITPASHDVQSSV
REPLGQRGVVLSSPSMLGQVEVILQKQPASVTGRGILNVGGSVGSQSEGEEGGGCCEEVP
GSFTVSFGIPSEEGTGAEEQDSDSEGDQDKPNKHRAKHARLRRGESQSEKQLKEAKSKCK
RIALLLTAAPPNPNNKGVLMFKKHRQRAKKYTLVSYGTGEDEPDYSDEDDEENEDKQGTH
TVELTLLAPSKSEPDKQLLANAQSGKGVLTINLDKGLLEIERSLNNQAEMESLPETKGKG
ALMFAQRRLRMDEISAEHEQLRSQGIPVEGVVEAEKKIAEHSYMQSTTEGHTYMDVNIHQ
QSQQQQQYQQYQEQQYYEQQQSYQQQQQQYQQQQQYQQQYQQQQYEQQQYHQQQQMYQQQ
QEYHQEQQHYSTNINGSVQHQTSEMQSSFSNRTAKPFSAENMTNATYSPAMSGTNQDSMG
QGEQIASRDERISTPAIRSGLLMDARKRTVGKPMFTFKEAPKVSPNPALLNLLNKGDRKP
GFESGPEEDYLSLGAEACNFLQPSRVKPKIPPPVAPKPVINPNSPPWSPQLEVTNQDMPQ
QAENSVSAPAVAPTTETTLGQEPKPAPAPAPEPSPPPALQEAPASATTEEQPTWTHQAES
QQQPLQMPAKEENSYINSTQQPQQQPEHAPVTSWSAGQTQALQQPPTNSWHPTQVQPQEP
PPSHSPPQPPWVTRQPPQIQAQVQPPTNNWTPPVQQSWNQPQEQPHPQQQYQPPWTHPQE
HPNQQQMQPAWGQDQTRQQPQPPWVQPSQTEGQHQPPWVTQQQQQSQPPWVQQVQSESQP
QPPWAQQPQHQAPHQAWPQAQAPGQPQPPWVSAQPQQQQQPSMNTWPPSQTQAQVQPPWV
QAGQTQPPTQPQASLNPWAPVPAQPEPQPSWAQQSPEHTQHPMNSWAQDQNPGQQQPPWA
QPVPPQPTPPSNWQQSPSRTPPQPINAWPPAQTQPQTPVNTWAPQAQQTPVNASASILNP
RPSPKPWNPPQSSPQSRTPPPPPQRMHSFTIGQRVSSPINPMATVLNPSSQGSALKMPAV
KGKGADMFAKRQSRMEKFVVDSETVQANKAIRSTSPVSSLPNEWKYTPNVRAPPSRSYNP
IQSPSYPPAATKQPPPGSPSTKAKKKEAKKQTPAPKPLNVVDVMKHQPYQLDSSLFLFGP
AAEAAKQAAAKAECPPPNPPVENQPIQYEQMAPVQQAGPYGAPYPQQVYGMPMQPMMHDG
HYQQNQVNAYPAPNPYQQPPGVQYQQAYNQQYQQPAPPPYQPQSPQSPNASYQQVPYQQA
NSPPYQQAQQAPYQPANSPPYLAAPPVPYQPQPPSTFAAPSFTIAARPDSAAGGNPVAAP
KPKFTAKKSSAQVWKPTAVEKE
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgggcattggggattacatctgcgtgacgctgcgtggtggtgcaccctggggattcacc
ctgcgagaaggagagggggacacctatagacccttaatagtcacccaggtagaggaggat
ggccgtgccttcctggccggtgtacggaatgatgatgaggcggtgtcactcaacggagag
ccgtgtgctgacctcacccttttgcaagccttggagctcattgacacatccgttgactgt
ctgcagctgcttgtgaaaagatacagcgccatcccctcagatgacaatgagtctgaagag
acatcctgtagtgagagggattcatctggtgaggtccttgagagcaccaccctacacatt
gtctcttcaaagcacaaggatctacgtatacctgagtccaaggatgatgcatacaatgta
gacttggacattgagttccccgacaggccccagctgctttgcactgagctccatactccc
tcatgtgaagatcagaaagcccaggtggaaaatgatggaggaacacggcggtgcctctct
cctggggacgtggtggagctccaggtgtctctctccgagcaaaccctggatgacattggt
tgcacatctctcgggtgtgctcttgggatcgaggggggactttcaaagagagaggcaatc
ttcacaatcccagccaccaccaccatcacccccgcatcccatgatgtgcaaagttctgtg
agagagccgctcgggcagcgcggggttgtgctcagctccccttccatgctcgggcaggtg
gaggtcattttgcaaaagcaaccagcatcagtgacagggaggggcatcctgaatgtgggt
ggaagtgttggatcccaaagcgaaggagaagaaggaggagggtgctgtgaggaagtccct
gggtcattcactgtctcatttggaattccctcagaagaggggacaggagcagaggagcag
gactctgattctgaaggggatcaagacaagcccaacaaacaccgggctaagcatgccagg
ctcagacgaggcgagagtcagtcagagaagcagttgaaggaggccaagtccaaatgtaaa
cgaattgctcttttacttacggctgcaccccccaaccccaacaacaagggggtgttgatg
ttcaagaaacatcggcagagggccaagaaatacacacttgtaagctacggcactggagaa
gacgaacctgactacagtgacgaagacgacgaggaaaacgaagacaagcaaggaacgcac
actgttgaattaacccttctggccccaagcaaatctgaaccagacaagcagcttcttgct
aatgcccaaagtggaaaaggtgttctgactatcaacttggacaagggtctgcttgagatt
gaaaggagcttaaataaccaagcagagatggagtctttgcctgaaaccaagggaaagggt
gccctgatgtttgctcaacgccgtctaaggatggatgagatttctgctgaacatgaacag
ctcaggagccaaggtatacctgtagaaggagtggtggaggctgaaaaaaagatagcagag
cactcatacatgcagtccacaaccgagggccacacttatatggatgtaaatattcaccaa
caaagccaacagcaacaacagtaccagcaatatcaagagcagcagtactatgagcaacaa
cagagctaccaacagcagcaacagcaatatcaacagcaacagcaataccaacaacagtat
cagcagcagcagtatgaacaacaacaatatcatcagcagcagcaaatgtatcagcagcag
caagaatatcatcaagaacagcagcactattctacaaacatcaacggctctgtccaacac
caaaccagtgaaatgcagagctctttcagcaatcgtactgcaaagccgttctcagcagaa
aatatgacaaatgccacttattctcctgcaatgagcgggaccaatcaagattctatgggc
caaggagagcagattgcttctcgggatgagcgcatctctactcctgcaattcggtctggc
cttttgatggatgcaagaaaaagaaccgttggcaagccaatgttcacttttaaagaagca
ccaaaagtttcgcctaaccctgcattgctaaacctactcaacaagggtgataggaagccg
ggctttgagtcaggaccggaggaagactacctcagtcttggagctgaggcatgtaatttc
ctccagccttcaagagttaaacccaagattcctccaccagtggctccaaagcctgtgatc
aaccccaactctcctccttggtccccacagctagaagtgaccaaccaggacatgcctcaa
caagctgaaaatagtgtgtccgcacctgctgtagcccccaccacagagactacccttggt
caagaaccaaagccagcccctgcacctgcccctgagccgtcccctcctcctgctctccag
gaggctcctgctagcgccacaacagaggaacagcccacatggactcaccaggcagagtcc
caacaacagcctttgcaaatgccagccaaagaagaaaacagttacatcaattctacccag
cagccacagcagcagcctgagcatgctcctgtgacgagctggtctgcagggcaaacacaa
gccctacaacagccacccaccaactcatggcatccaacacaagtgcagccacaggaacca
cctccaagtcattcgccaccacagccaccttgggtgacacgtcagcctccccagatccaa
gcacaggttcaaccccccacaaataattggacaccaccagttcagcaatcttggaatcaa
cctcaagagcaaccacaccctcagcaacagtatcagccaccatggacacaccctcaagag
catccaaatcagcaacaaatgcagccggcttggggtcaagaccaaacacgacagcagccc
cagcccccatgggtacagccatcacaaacagagggtcagcatcaaccgccatgggtgact
caacagcagcaacaatcccagcctccttgggttcaacaagttcagtcagaatcccagcca
caacctccatgggcacagcaaccacagcatcaggctcctcatcaagcatggccacaggca
caagcaccaggccagcctcaaccaccttgggtgtcagcgcagcctcagcagcaacaacag
ccttcaatgaatacatggcctccttcacaaactcaagcccaagttcagccaccttgggtc
caagcaggtcaaacacagcctcctactcaaccccaagccagtttgaatccatgggcacca
gtacctgcgcagcccgagccccaaccatcatgggcccagcagtccccagaacatacacag
cacccgatgaattcttgggcccaagatcaaaaccctggccaacaacaacctccctgggct
caacctgttccaccccagccaacaccaccgtcaaattggcaacagtccccttcaaggact
ccaccacagccaataaatgcatggcctccagctcagacacagcctcagacacctgtgaat
acctgggcaccacaggcacaacagactcctgtgaatgcttcagcatcaatactgaaccct
cgtccttctccaaaaccttggaatccaccacaaagttcgccccaaagtcggactcctcca
cctccaccacagagaatgcactcctttactattggtcaaagagtttcatcacccatcaac
ccaatggccactgtcttaaatccatcatcccagggttcagctttaaaaatgccagcagtt
aaaggaaaaggagctgacatgtttgcaaagaggcagtcccgtatggagaagtttgttgta
gattctgagactgtgcaagcaaacaaggcaatccgctcaacatcgccagtttcgtcctta
cccaatgagtggaagtatacaccaaatgtacgtgctccaccatcacgttcttataatccc
attcagtcaccttcttatcctccagcagcaacaaagcagccaccacctggtagcccttcc
accaaagccaagaaaaaagaagcaaagaagcaaacacctgccccaaaacccctcaatgtt
gttgatgttatgaaacatcagccatatcaacttgattcttcactttttctctttggccca
gccgcagaggctgccaagcaagctgcagctaaagctgaatgcccaccccccaacccacct
gttgaaaatcaaccaattcaatatgagcaaatggctccagtccagcaagctggaccatac
ggtgccccatacccccagcaagtgtatgggatgccaatgcagcccatgatgcatgatggc
cattatcaacaaaaccaagttaatgcttatcctgcccccaatccctaccagcaacctcca
ggtgttcaataccagcaagcctataatcaacagtatcagcagcctgcacctcctccttat
caaccccaatctcctcagtctccaaacgcttcctaccagcaggttccataccaacaagcc
aatagccctccctatcagcaggcacaacaggccccttaccagccagcaaacagccctccc
tacctggctgctcccccagtaccttaccagccacagcctccctctacttttgccgctcct
agttttactatagcagcaaggcctgattctgcagcaggtggtaaccctgtagctgctcct
aaacccaaatttactgctaaaaagagctcagcccaggtgtggaagcctacagccgttgaa
aaagaatga
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integrated database retrieval system
