Halichoeres trimaculatus (threespot wrasse): 141786464
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Entry
141786464 CDS
T11192
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
141786464 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
htc03021
]
141786464 (taf5)
03036 Chromosome and associated proteins [BR:
htc03036
]
141786464 (taf5)
Transcription machinery [BR:
htc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
141786464 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
141786464 (taf5)
Chromosome and associated proteins [BR:
htc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
141786464 (taf5)
STAGA complex
141786464 (taf5)
TFTC complex
141786464 (taf5)
SAGA complex
141786464 (taf5)
SLIK complex
141786464 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_Nup120_160
VPS8_N
PROPPIN
Beta-prop_VPS8
LisH_TPL
Beta-prop_WDR11_2nd
LisH_PAC1
Motif
Other DBs
NCBI-GeneID:
141786464
NCBI-ProteinID:
XP_074521204
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MAAVQGGLVDAVEEKEIKSEPPNDGGGNNNANDGRVLSSSPGSSSSAGSNKSATGAPEDQ
QTLLAVLQFLRKNKLTESVEILRREAGLPEDSLDGKGTDSSGAGSGAAAGSADLEGVDAS
ALLSRVTGSSSSTVAQAPVKAPGEDQPDVNVVLSAYSQQGDPALYGVYYSGLKKFIESVL
DCHRAELSQVFYPLFVHMYLELVYNNHENEAKVFFEKFSGDQECYYEDDLRVLSGLTKKE
HMRGNETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSK
SQIDAMSGSLAGEGKREANKTKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKDS
MGSKSKKQDPNAPSQTRIPLPELKDSDKLDKIMYMKEATKKIRLGPDNLPSICFYSFLNA
YQGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMD
EKTASESKILYGHSGPVYGISFSPDRNYLLSSSEDGTVRLWSLLTFSCLVGYKGHNYPVW
DTHFSPHGYYFVSGGHDRVARLWATDHYQPLRMFSGHLADITCTRFHPNSNYVATGSSDR
TIRLWDVLTGNCVRIFTGHKGPIHALSFSPNGKFLASGATDGRVLLWDIGHGLMIGELKG
HTDTIYSLKFSRDGEILASGSMDNTVRLWDAMKAFDDLETDDFTAATGHIHLQDNSQELL
LGTYMTKSTPVIHLHFTRRNLLLAAGAYNP
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtacagggtggtctggtcgacgcggttgaggaaaaagagataaagtcagaa
ccaccaaacgacggtggagggaataataatgcaaacgacggcagggtactttcttcgtcc
cccggctccagttcatcggctggaagtaacaagagtgcgacaggagccccggaggaccag
caaacgcttctggctgtcctgcagttcctcagaaagaacaaactgaccgagtccgtcgaa
attttgcgtcgtgaagctggattaccagaggattcactggatggaaaagggactgattca
tccggggcaggttcgggtgctgcagcgggcagtgcggatttggaaggtgtagatgcaagc
gctctgctgagccgggtgaccggatcatcatcctccaccgtagcacaggcgccagtaaaa
gctcctggggaggatcagccagacgtcaacgtggtgctgtcagcttacagccagcagggg
gatccagctctgtatggagtttactacagcggcctgaagaaatttattgaatcagtttta
gactgtcatcgagcagaactgtcccaggtcttttacccactgtttgttcacatgtacctg
gagctggtatacaacaatcatgagaatgaggccaaggtgttctttgaaaagttcagtggg
gatcaggagtgctactatgaagatgatctgcgtgttttgtccggcctaaccaagaaagag
cacatgagaggcaatgagactctgttggatttccgcaccagcaagtttgtcctgcggatc
tctcgtgactcctaccagctgcttaagaggcacctgcaggagcgccagaacaatcagata
tggaatatcatccaagagcacctctatatcgacatctttgatggcatgccacgtagcaag
agccagattgatgccatgtctggcagcttggctggggagggaaagcgggaggccaacaaa
acaaaggtttactatggactgctgaaggaaccagaaattgagctgcccctcgatgatgag
gatgaagaggcggagaatgaagagggtaaacccaagaagaagaaacccaagaaggacagc
atgggctccaagagcaagaaacaggatcctaatgcaccctcacagacaaggatacctctg
ccagaattaaaggactcagacaaattggacaagatcatgtacatgaaggaggccactaaa
aagatacgcctgggaccagataacctcccatccatctgcttctactcatttctcaatgct
taccaaggtctgactgcagtagacttcacagatgactccagcctgattgccggaggattt
gctgactcgacagtacgagtgtggagtgtcacgccgaaaaaactccgcaaggtcaagtct
gcagcagacctgaatctgatagacaaagagtcagatgatgtgctggagaggataatggac
gagaagacagccagtgagtctaagatcctctatgggcacagcggcccggtgtacggtatc
agcttcagcccagacaggaactacttgttgtcaagttctgaagacggaacagtcagactg
tggagtcttttgacattttcttgtctagtgggctacaaaggccacaactaccctgtgtgg
gacacgcacttttccccacatgggtactattttgtctctgggggacatgatcgagtagct
cgtctgtgggcaacagatcactaccagcctctgcggatgttttctggtcaccttgctgat
atcacttgcacccgatttcatcccaactccaattatgttgccactgggtcttcagatcgc
accatccggctctgggacgtcctgactggaaactgtgtccggattttcactggtcacaag
ggtcctatccacgcgttgtctttctctccaaatgggaagttcttggcttcaggggccacc
gatggcagagttcttctgtgggacattggtcatggacttatgattggagagcttaaaggc
cacacagacacaatttactcccttaaattcagtagagatggggaaatccttgcatctggc
tctatggacaacacagttcgcctctgggatgctatgaaagcatttgatgatttagagact
gatgattttacagcagctacgggacacatccatctacaagataattcccaggagcttctg
ttggggacatacatgactaaatctacgcctgtcattcaccttcattttacccgcaggaac
ctgctgctggctgctggggcctacaatccataa
DBGET
integrated database retrieval system
