Halichoeres trimaculatus (threespot wrasse): 141786650
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Entry
141786650 CDS
T11192
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc04510
Focal adhesion
htc04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141786650 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141786650 (lamb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
141786650
NCBI-ProteinID:
XP_074521308
LinkDB
All DBs
Position
Unknown
AA seq
1790 aa
AA seq
DB search
MLALQVLVLLALQVLLSAQVGRAQVDVSLPELSDVCTEGSCYPATGDLLIGRAHQLSSTS
TCGLIHPEPFCIVSHLQEEKKCFVCDSADAYDERRDQTSSHRIENVVTTFAPNRLKTWWQ
SENGLENVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKTWQVYRYFAYDCETS
FPTVSQGPMQKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPRIQNMLKITNL
RVKFTKLHTLGDNLLDSRMEIKEKYYYAVYDMVVRGNCFCYGHASECAPIQGAGQAREGM
VHGHCMCNHNTKGLNCEQCQDFYHDLPWRPAEGRNTNACKKCNCNQHSDLCHFDMAVFEA
SGNVSGGVCDDCQHNTAGHNCEQCKPFYYQHPERSIRDPNVCQPCNCDPVGSLNGGMCDG
MTDIRAGLIAGQCRCKVNVEGERCERCRDAHYGLSDEPEGCKACTCSPLGTVPGGNPCDS
ETGNCFCKRLVTGRDCDQCVSEHWGLSNDMDGCRPCDCDLGGAINNQCDQVSGQCVCRSH
MFGRRCDQVESGFYFIALDHYTYEAEDAKFGPGVTVVPRPHPLDRSPTWTGSGLVNVPEG
AYLEFTVDNIPHSMEYDIIIRYEPQLPDQWEEVLMTLMRPGPIRADSRCVNTVPDDDNQM
TSLHPGSRYVVLPRPVCFESGLNYTVRLSLPLYSALSDVQSPYTLIDSIVLMPHCKNLEI
FSASEEGDSSSWDTFQRYRCLDNSQGVIKSQMTEICRNFIFSISAMLHQGAKECQCDPQG
SLSTVCDPSGGQCQCRPHVVGRNCDRCAPATFQFGPNGCRGCECDPQGSQSALCDQLTGQ
CVCVPGAYGRQCDRCLPGHWGFPACRPCSCNGHADDCDPVSGRCISCRDHSTGHTCDRCL
DGYYGDPVLGSGDHCRPCKCPDGPESPRQFAGSCYRGDDSQQVVCVCNNGYKGARCDECS
PGYYGNPEQAGGQCQPCQCNGNIDPSDPESCDAQTGECQRCLYHSEGAACQNCKLGYYGN
ALLQDCRKCVCNRLGTDPAHCPAPGDCQCEGRSGQCHCLANVVGQHCDTCAPDTWNMASG
SGCQSCDCDPEHSYGTSCNEISGQCSCKSGFGGRTCRECRELFWGDPEVQCHACDCDPRG
VSQPQCHKDSGHCVCVEGVSGPRCDVCARGFSGTFPDCRRCHQCFSEWDHVIGQLTNQTH
RLVNKVNTIKASGVSGPYRKSIDSMEQSINDIRTLLNQNPASQPLSEIQELLQQTSDLMG
ALSQMLNHTEQTLVTVEDLDSAAETKLDSVIGDAQKLEQTVRELLDQVEFIKNSDIRGAT
HSVNKYFLQSQAAEARTNSSVNDHGSAVESSEALRQVIEDKLNQTREKFLRRHTEHAQRL
DDLAGQLQTLDLSEISHKTCGSPSSGQESCSSPCGSLGCVDSEGQTRCGGGDCDGVVTAA
VRVWTKARDSEQKILGAMEEVEKLSKMVSETKLKADEAKLSAQDVLLKTNRTKVKLDRSN
EELRGLIKQIRDFLTQDAADLESVELVANEVLAMQMPTTPAQMQNLTNEIRKKVRELGHV
ETILQQSSDDIQRAETLLEQARRASEEATDVKDSAETVQRALEEAKRAQTSANNAIQQAA
TDIHNTNKLLSSVESETADAELKLNNATQRLQMLEQDVTLLKDKSLNLTLSSEQTNQDAA
SIEKMAEEVKKDLNSDLKERYTKVEELIGQKAGGVAEAKKRAESLQQEAKELLLKASDKL
QLLKDLEKSYEENQRSLEAKADQLVELEADVKMLLQVISHKTTVYSTCVF
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atgttggcgctccaggtcttggtcttgctcgccctacaggtgctgctgtcggctcaggtg
ggcagggcccaggtggacgtcagtcttccagagctcagtgacgtctgcactgagggcagc
tgttacccagcaacgggggaccttttgatcggacgcgcccatcaactgtcgtccacctca
acctgtggactgattcaccctgaaccattttgcatcgtcagtcacctgcaggaggagaag
aaatgcttcgtgtgtgactctgctgatgcgtacgacgagcggagggatcagaccagcagc
catcgcatcgagaacgtggtcaccacgtttgctccgaacagactgaagacctggtggcag
tcagagaacggtttagaaaacgtcacgatccagcttaacttggaggcagagtttcacttt
acacacctgatcatgacctttaagacatttcgacctgctgccatggtgatcgagaggtca
gctgactttggaaaaacatggcaggtttatcgatacttcgcctacgactgtgagacttcc
ttccccaccgtttcccagggtccaatgcaaaaggtggatgatgtcatctgtgactcccgt
tactcagacatcgagccgtccacggagggagaggtgatcttcagagtcctggaccccgcc
ttcaggatcgatgatccctacagccccagaattcagaacatgttgaagatcaccaacctg
cgggtcaagttcactaaattgcacactcttggcgacaacctgctggactctcgcatggag
attaaggagaagtactactacgccgtctacgacatggtggtccgtggaaactgcttctgc
tacggtcacgcctcagagtgtgcgcccatccagggggcgggccaggccagagagggcatg
gtgcatggacactgcatgtgcaaccacaacaccaaaggtctgaactgtgagcagtgtcag
gatttctaccatgacctcccctggagaccagccgagggacgcaacaccaacgcctgcaag
aagtgtaactgtaaccagcactcggacttgtgtcacttcgacatggccgtgtttgaggct
tcaggaaacgtcagtggaggagtttgtgatgactgtcagcacaacacagctgggcacaac
tgtgagcagtgcaaaccgttttactaccagcacccggagagatccatcagggaccccaac
gtctgccagccctgtaactgcgaccctgttggctctctgaacggaggaatgtgtgacggg
atgacagacatccgagccggtctgatcgctggtcagtgtcgctgcaaagtcaacgtggag
ggggaacgttgtgagcgctgcagagacgcacattatggtctgagcgacgaaccggaaggc
tgcaaggcgtgcacctgtagccccctgggaactgttcctggaggaaatccctgtgacagt
gaaacaggaaactgtttttgtaaacgtctggtgactggaagagactgtgaccagtgtgtg
tctgaacactggggactcagtaatgatatggatggctgcagaccatgtgactgtgacttg
ggcggagccatcaacaaccagtgtgatcaggtgagcggtcagtgcgtgtgcagaagtcac
atgtttggacgtcgctgtgatcaggtggagtctggcttctacttcatcgctctggatcac
tacacctacgaggcagaggatgctaagtttgggcctggagtgacggttgtgccgaggccc
caccccctggaccgcagccctacctggacaggttcaggcctggtcaacgtcccagaagga
gcttacctggagttcactgtggacaacatcccccactccatggagtatgacatcatcatc
cgctatgagccacagcttcctgaccaatgggaagaggttctgatgactctgatgagacct
ggaccaatcagagctgacagccgctgtgtcaacacggttcctgacgatgataaccagatg
acctcacttcacccaggctcacggtatgtggttcttcccagacctgtctgctttgagtct
ggcctgaactacacagtccgcctcagtctgccgctgtactcggccctcagtgacgttcag
tcgccgtacacgctcatcgactcgatcgtcctcatgcctcactgtaaaaacctggagatc
ttctcggcctcggaggaaggcgactccagcagctgggacacctttcagcgctatcgatgt
ctggacaacagtcagggcgtcatcaagtctcagatgactgaaatctgtcgcaacttcatc
ttcagcatctctgccatgctgcaccaaggagctaaagaatgccagtgtgaccctcagggc
tccctcagcactgtctgtgatcccagcggaggtcagtgccagtgtcgcccccatgtggtt
ggcaggaactgtgaccgctgtgctccagctacgttccagtttggaccaaatggatgcaga
ggatgtgagtgtgaccctcagggctcacagagcgcgctctgcgatcagctgacaggtcag
tgcgtgtgtgttcctggagcgtacggccgtcagtgtgaccgctgtctccccggtcactgg
ggcttccccgcctgtcggccctgctcctgtaacggacacgcagacgactgtgaccccgtc
agtggacgctgcatcagctgcagggaccacagcacgggacacacctgtgacaggtgcctg
gatggatactatggtgacccagtgctggggtcaggtgatcactgtcgtccatgtaagtgt
cctgacggtccagaaagtcctcggcagtttgcaggaagttgttaccgtggtgatgactct
cagcaggtcgtttgtgtgtgcaacaacggatacaaaggcgctcgctgtgatgagtgctca
cctggttactatggaaacccagagcaggcgggggggcagtgtcagccatgtcagtgtaat
ggaaacatcgacccatctgaccccgagtcttgtgatgcccagaccggcgagtgtcagcgc
tgcctgtaccacagcgagggcgctgcctgtcagaactgcaagctaggttactatggcaac
gcgctgctgcaagactgcaggaagtgtgtctgcaaccggcttggcacagaccccgcccac
tgtccagcgcccggggactgtcagtgcgagggccgcagcggtcagtgtcactgcctcgcc
aacgttgttggacaacactgtgacacctgcgcacctgacacctggaacatggcgagcggc
tccggctgtcagagctgcgactgtgaccctgaacactcatacgggacatcctgcaacgag
atcagtggacagtgctcctgcaagtctggctttggaggaagaacctgcagagagtgtcgg
gagctcttctggggggaccctgaggtccagtgccatgcctgtgactgtgatcctaggggc
gtgtcccagcctcagtgtcataaagacagtggtcactgcgtctgtgttgagggcgtctcc
ggtcctcgctgtgacgtctgtgctcgtggattctctggaacgttccccgactgtcgccgc
tgccaccagtgcttctcggagtgggaccatgtgatcggtcagctgaccaatcagacgcat
cgccttgttaacaaggtcaacaccataaaagccagcggtgtcagtgggccgtacaggaag
tccatcgacagcatggagcagagcatcaacgacatccggaccctcctgaaccaaaacccg
gcctcacaacctctgagcgagatccaggagctgctgcagcagaccagtgaccttatggga
gccttgagccagatgttgaaccacacagagcagactttggtcacggtggaggacttggac
tcggctgcagagactaaactggactctgtgattggggacgctcagaaactggagcaaacg
gtccgggagctgctggatcaggtggagttcatcaagaactctgacatcagaggggcgacc
cacagcgtcaacaagtacttcctgcagtcccaggcagctgaagcccgcaccaactcctct
gtcaacgaccacggcagcgctgtagaatcctctgaagctctacggcaagtcatagaggac
aaactgaaccagaccagggagaagtttctgagaagacacactgagcatgctcagagactg
gatgacctggcaggacagctgcagactctggacctatcagagatcagccacaagacctgt
ggtagtccatcatcaggtcaggaatcatgctcctctccctgtggaagtctgggctgtgtg
gactcagagggtcagaccaggtgtggaggtggggactgtgatggtgtggtgacggctgcc
gtcagagtctggacgaaggccagagactctgaacagaaaatcctgggagccatggaggaa
gtggagaaactctcgaagatggtgtcagagaccaaactgaaagcagacgaggcgaagctg
agtgctcaggatgtcctgctgaagaccaacaggaccaaagtgaagctggaccggagcaac
gaggagctgagaggcctcatcaaacagatccgagacttcctcacacaggacgctgcagac
ctggagagtgtggagctggttgctaatgaggtcctggccatgcagatgccaaccacaccg
gctcagatgcagaacctgaccaatgagatcaggaagaaggtgcgggaactgggacacgta
gagaccatcctgcagcagagctctgatgacatccagcgggctgagaccctgcttgagcag
gcccggcgagccagtgaggaggccacagacgtgaaggactctgcagaaacagtacaacga
gctctggaggaggcaaagagagctcagacctcagccaacaacgccatccagcaggccgca
accgacatccacaacaccaacaaactgctgtcctcggtggagtcggaaacagcagatgca
gagctgaagctgaataacgccacccagaggctgcagatgctggagcaagacgtgacgctg
ctgaaagacaagtctctgaatctgactctgagcagtgaacagaccaatcaggatgctgcc
agcattgagaagatggcagaggaagtaaagaaagacctaaactctgacctaaaggaaagg
tacaccaaagtggaggagctgattggacagaaagcagggggtgtggctgaggcaaagaag
agggcggagtcactgcagcaggaagctaaagagctgctcctcaaagccagcgacaagctg
cagctgctcaaagacctggagaagtcctatgaggagaaccagcgctcccttgaggccaag
gcagatcagctggtggagctcgaggctgatgtgaagatgctgctgcaggtgatcagccac
aagaccaccgtctacagcacctgtgtgttctag
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integrated database retrieval system
