KEGG   Halichoeres trimaculatus (threespot wrasse): 141787201
Entry
141787201         CDS       T11192                                 
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
htc  Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:htc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    141787201 (taf5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:htc03021]
    141787201 (taf5l)
   03036 Chromosome and associated proteins [BR:htc03036]
    141787201 (taf5l)
Transcription machinery [BR:htc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     141787201 (taf5l)
   Coactivators
    SAGA/TFTC/STAGA complex
     141787201 (taf5l)
Chromosome and associated proteins [BR:htc03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     141787201 (taf5l)
    STAGA complex
     141787201 (taf5l)
    TFTC complex
     141787201 (taf5l)
    SAGA complex
     141787201 (taf5l)
    SLIK complex
     141787201 (taf5l)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I TFIID_NTD2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP WDR90_beta-prop_4th NBCH_WD40 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_IFT140_1st RMC1_N Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_WDR19_1st WD40_like PEP5_VPS11_N Beta-prop_NWD2_C PROPPIN Beta-prop_IP5PC_F WD_LRWD1 Nbas_N Lysis_col Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 141787201
NCBI-ProteinID: XP_074521598
LinkDB
Position
Unknown
AA seq 600 aa
MKRVRTEQIQYAVAQYLKRRQYVDTDGSLKGAKLFQSAEEMAASLTVQTESGCANIISAA
PCQSDPQQYETQYSRLRAFLSETDISWAKEASSILYPLFVYLHLDMVQCGLKGAVDGFYS
RFHGAFLQDSEQRAIIEQLCHVLTAQDVAINPKLSAFLEHKYVVHLTEPAYNYLLRYLQS
EDNSALCRAITTHLQMEVSASRRTDYQLYGAVGGATAAPNSTSTWAGVDGAESGEGVEVP
AGIPQNEAALQALQDCIKKVREGPPTLTTVCFYAFHHTEQMLNTAEVSADSRLLSAGYDS
STVKLWSLRARKLKAKPHQADVSQIHLACDVLEKEVDEEDSSGSEIKTLRGHSGPVFRTA
FLTDSSGLLSCSEDTTIRYWDLGSFTNTALYQGHVYPVWDVDVSPCSLYFASGSHDRTAR
LWTFSRTYPLRLYAGHLSDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFTGHRG
PVLSLAFSPNGKYLASAGEDQRVKLWDLSSGTLFKDLRGHTDSVTSLSFSPDSSLVASSS
MDNSVRVWDIRNSHGGTPADGSSSELVGLYTGNTSNVLNVQFMACNLLLVTGTAQEKTEQ
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgaagcgggttcgaactgagcagatccagtatgctgtggctcagtacctgaagaggagg
cagtacgtggacactgatggctccctgaaaggtgccaagctcttccagtcagctgaggag
atggcggccagcctcacagtgcagacagagtcagggtgtgccaacatcatctctgctgct
ccatgccagtctgacccacaacagtatgagacccagtactccagactgcgtgcctttttg
tcagaaaccgacatatcttgggcaaaggaggcgagcagcatcctctaccccctctttgtc
tacctccacttggacatggtgcagtgtggcctgaagggggcagtcgatggcttctacagt
cgattccacggagcttttcttcaggacagtgagcagagggccatcattgagcagctttgc
catgttctcactgctcaggatgtggccataaacccaaaactgagtgcctttctggagcac
aaatacgtggttcacctgacggagccagcctacaactacctgctgcggtacctgcagagc
gaggacaacagtgcgctctgcagggcaataaccacacacctacagatggaggtctctgca
tcaaggcgtacagactaccagctttacggcgctgttggcggagcaactgctgccccaaac
tccacctcaacctgggcaggagtggatggagcagagagtggggaaggagtggaggtccct
gcggggatccctcagaatgaagcagccctgcaggctttgcaggattgcatcaagaaagtg
cgcgagggacccccgacactaaccactgtgtgcttttacgccttccaccacacagagcaa
atgctgaacactgcagaggtctcggctgacagccggctgctgagtgctggctacgacagc
tctactgtgaagctgtggagcctccgggcaagaaagctgaaggccaaacctcatcaggct
gacgtgtcccagatccacctggcctgtgatgtactggagaaggaagtggatgaagaggac
agttcaggcagtgagataaagactctgcggggtcacagtggccccgtgtttcgtactgcc
ttccttaccgacagctctggtctgctctcctgctctgaggacacaaccatccgctactgg
gacctgggcagcttcaccaacacagcgctctatcaaggacacgtctacccggtgtgggac
gtggatgtcagcccctgcagcctgtattttgccagcggctcacacgaccgcactgctcgc
ctgtggacattttctcgcacttacccactgcggctctacgctgggcatctctctgatgtt
gactgtgtcaaattccacccaaactcgaactacctggccactggatccacagataaaact
gtccgtctttggagcactcagcagggggcatctgttcgccttttcactggacaccgaggc
ccggtgctgtcgctcgctttctcccctaatgggaagtacttggcatctgctggcgaggac
cagagggtgaagctgtgggacttatcatcaggaacgttgttcaaagatctacgggggcac
actgacagtgtcaccagcctgtccttcagcccagacagcagcctggtggcatcatcgtct
atggacaactctgtccgagtatgggacatccgtaactcccacggagggactccagctgat
ggctcgtccagtgagctggtgggattgtacacaggaaacaccagcaacgtgcttaacgtc
cagttcatggcctgcaatctgctgctggtcacgggaaccgcacaagagaaaacggagcag
tag

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