Halichoeres trimaculatus (threespot wrasse): 141787213
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Entry
141787213 CDS
T11192
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141787213 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htc03019
]
141787213 (zcchc7)
03016 Transfer RNA biogenesis [BR:
htc03016
]
141787213 (zcchc7)
Messenger RNA biogenesis [BR:
htc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
141787213 (zcchc7)
Transfer RNA biogenesis [BR:
htc03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
141787213 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
AIR2-like_ZnK4
Zn_ribbon_2
Motif
Other DBs
NCBI-GeneID:
141787213
NCBI-ProteinID:
XP_074521628
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MSSMNQDREELEDDLYQEEEANSDGSEVNSELEFHLYSQLHYSSNTGNIEQQENEGEKAE
RQENLPLDLAEKTSDGEQEHTTESRPQSPDANDLERHLKKMKKKRKKQDEQKKRKSIPKS
TGSSLLFEEVIVIDSGPEIISISEGDTADDNEGVCASKGQSALSSTPAGQGTQKKKKSLH
GPVTLDSSSSDSDSEESKSKPESSESSDSSDSSDSSDSDGLENWMILGRGKQDGDYSISL
NLEGGSDSNADADEHGTWKVSEKDKAAQIYNKDKGSRNPVIRLPNRYYTDKSVQCRNCDK
TGHLSKNCPEPKKLSSCFLCGTPGHLGNQCPNRHCNNCGLPGHLYESCSERSYWHKQCHR
CRMTGHFFDACPEIWRQYHITTKPGVPVKQPGEDQGRSPAYCFNCSRKGHFGHTCTRQRM
FNGTYPSTPFINYYDNMDAINRRKHRIKMKIKELKQNGLFPSGRETLPTPGPPTKRQKLD
HNRSNHKPNHKPHQSNNHTASRSHIFFKDSYDSKDTATKTNKHNKHKQQETTSNVKPWKP
KRPVPTSRDPPSKLILDEADDFPRGGGRGDNVVMKTKKKRKRSKKTKQDPSGGHDSRAHG
GAKGEAHGSKQDRGEKKKNRRSYDKGDYHKKSQRYPTDENLFTIKQRRKRSR
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcatgaaccaggaccgggaggagttggaggatgatctttatcaagaggaagag
gcaaactctgatgggtcagaggtcaacagtgagctggagttccacctctacagccagctc
cactactcctccaatactgggaacatagagcagcaagagaatgaaggagagaaagcggag
agacaggaaaacctgccgcttgatctggcggagaagacaagtgatggggagcaggagcac
acaacagaaagtaggcctcagtcacctgatgcgaatgatttagagcgacacctgaaaaag
atgaagaagaagaggaagaaacaagacgaacagaagaaaagaaaaagcatacctaagagt
acgggatcatcgttgctttttgaagaggtgattgtgattgactccggccctgaaatcatc
tccatctctgagggtgacactgcagacgacaatgagggggtttgtgcctcaaagggtcaa
agtgcactgagttctacccctgctggacagggtactcaaaagaagaagaagagtcttcat
gggcctgtgactttggactccagcagctccgattcagattcagaggagtcaaaatcaaag
cctgagtcgtctgagtcgtctgactcttcggattcctctgattcctctgattcggatggg
ctggagaactggatgatcctgggtcgagggaagcaggatggagactactccatctcactc
aacctggaaggagggtctgacagcaatgcagatgctgacgaacatggcacctggaaggtt
tctgaaaaagacaaggcggctcagatctataacaaggacaagggttccaggaatccggtg
atccggctgccaaacagatactacactgacaaaagcgtccagtgcagaaactgcgacaag
accggacatctttccaagaactgccccgagcccaaaaaattgtcgtcttgctttctttgt
ggcacccctggccacctggggaaccaatgtcccaacaggcattgcaacaactgcggcctg
ccaggacacctctacgagtcctgcagcgagcggtcgtactggcacaaacagtgtcaccgc
tgcaggatgaccggacacttttttgacgcttgcccagagatctggagacagtatcacatc
acaactaagcctggagttcctgtaaagcagcctggagaagaccaggggagaagtcctgcc
tattgcttcaactgctccaggaaaggacactttggacatacatgtacacgacagagaatg
ttcaatgggacgtaccctagcaccccgttcatcaactactatgacaacatggatgccatc
aaccgcaggaagcacaggataaagatgaagataaaagaactgaaacagaatggcctcttc
ccttctggtagagagacccttcctactcctggacctccaacgaagagacagaaactggac
cataacagaagcaaccacaagcctaaccataaaccacaccaaagcaacaaccatacagca
agccggagtcacatttttttcaaagatagctatgactctaaggacacagcaaccaaaaca
aacaaacacaacaagcacaagcaacaggagaccacaagcaatgtaaaaccatggaagccc
aagagacccgtgcccacttccagggacccaccatccaaactgatactggatgaggctgat
gacttccccagaggcgggggcagaggtgacaacgtggtgatgaagacgaagaagaagagg
aaaaggtcgaaaaaaacaaagcaggatccttcagggggacatgacagcagagcacatggg
ggtgcaaagggggaagctcatggatcaaagcaagataggggggaaaagaagaagaacagg
agaagctatgacaagggggactatcacaaaaaatcgcagaggtacccaacagacgaaaac
ctgtttaccatcaaacagaggaggaagaggagcagatag
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