Halichoeres trimaculatus (threespot wrasse): 141787219
Help
Entry
141787219 CDS
T11192
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141787219 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htc03019
]
141787219 (exosc1)
Messenger RNA biogenesis [BR:
htc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
141787219 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
141787219 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
141787219
NCBI-ProteinID:
XP_074521636
LinkDB
All DBs
Position
Unknown
AA seq
194 aa
AA seq
DB search
MSPMKLCVPGDRLCSVEDCIPGTGVYLRHGYIYSSLAGYVLKKNEGEELPVISVVRETET
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPRTHAKE
FRKVARVQPEYLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgatgaagctgtgtgttccaggtgacaggctgtgcagtgtagaagactgtatt
cctggcacaggagtatacctgcggcatggctacatatactcctcacttgcaggatatgtg
ctgaagaaaaatgagggagaggagttaccagtgatctcagtggtgagggaaacagaaaca
caactattaccagatgtaggagcaatagttacctgtaaggtaacaagtataaaccccaga
tttgcaaaggttcacatcctttatgtcggctcaacaccactgaaagatcgcttcagaggt
acaatcaggaaagaagatgtgcgagcaactgagaaggacaaggtggagacgtacaaaagc
ttcagacctggtgacatcgtcctggcaaaagtgatctctctcggtgatgtacagtcaaat
tacctgttgacaacagcagaaaatgaactgggggtcgtcgtcgcccacagtgaagcaggt
gctcagatggttcccatcagctggtgcgagatgcagtgtccacgaacacacgccaaggag
ttccgcaaagtggcacgcgttcagcctgagtatttacaggcgtga
DBGET
integrated database retrieval system
