Halichoeres trimaculatus (threespot wrasse): 141787906
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Entry
141787906 CDS
T11192
Symbol
lmo7b
Name
(RefSeq) LIM domain only protein 7b isoform X1
KO
K06084
F-box protein 20
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
141787906 (lmo7b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
htc04121
]
141787906 (lmo7b)
Ubiquitin system [BR:
htc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
141787906 (lmo7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
141787906
NCBI-ProteinID:
XP_074522712
LinkDB
All DBs
Position
Unknown
AA seq
1258 aa
AA seq
DB search
MEWRQQTSVSCADAFTEAQRWIEEVTGKSFGCNDFRAALENGVLLCDLINQLKPGIIKRV
NRLSTPIAGLDNVTIFLKACGKLGLNVSQLFHPGDLQDLSTRATLRRDESNRRLKNVLIT
IYWLGRKAHLDAFYSGPQLNFKAFEGLLGLALSKALDEGGNVFRDSWDQEKEEDLHKRLS
YRMENCGLSIDSVEPRALRPNSEGCGSDAEAEQVFKMETTQPSMQQNRGYVPPPLLQRKQ
GQEENGVLSRSKSLSDIPMVYPVRKVPEGHNLYDRMDRDASMMAQEWNQENKRKCSVAAK
DSEAQWQDDLTKWKNRRRSTKSDARRKSQDREHVISQMVNGVRTTFDRNGGQGGLLKGEQ
LSPRRHNPAPCPYSTSPPSKSSSLDLKPRTRALLARSYATESPYYSPTAPLTSSQSLGSS
GGSMPISDGIIPGEETHHASLASDGAGVTTPTPDCPFSSKTPIRAQGCLDPFQPTSETAQ
SNYVLTNQISTLTTTLQPVKTAESTSTRVSSYTKKVPAPSLDAGHQSGVDPLEDLSHHNH
ETQKESQHTLCEPAVEMGQGQQSAGSYKYFSRAGSWSGSASLPRGYRRSEGSSRLSSAIT
ARPFGSKQSRVSSLPRLCDVDNNGSLLMKCEKEEYPSPPAESSLKRQTATAHLKGPFQTA
ITQRKETHLQQNGKAHGEEVKGVTLLSQKSFQTSSYHQLSSQTQQLPQPFSNPNRSSNLP
SNTSTDGLKAEHSDMRVSLTLKPNSRPDFGFQTRWDSTGARVKFVQPGSPAEQCQLCVDD
EIVAINGVAVAHLNNTQWIDKMTSSLQTGSLTMDIRRYGNKDWSSSEGGHHIQPGQSRMT
LNLTTAAPILIGYPDHHANSGASSDTTVNVSKFNGQSDNVMQSKVMNGEHADSHRTARSK
GGSESAISDLQVPSISPSSPSWSWDHEEDRRRQEKWQEEQERLLQEQYQRDQERLDAEWQ
KAQRDAVGQNPFASEMTNGNGSSSSTLHHVNGLTNKTREEQQSPERRQLTEAGSKTQSDS
QGLQRDKINEQAWAEDACGFAQLSPAHRAKSLSTPALAGPPKQMKGEGRKSLGHSVSQVE
KERQQILEEMKKRTHLLTDNSWIRQRSSSVNKEPVYVGVPLKRYESLDNLDTFRQSPILS
STFSYPRPHSAAAGYCAPTRYSSSRYNTGSVQPQRNPAMDSTQGRISGRRTCCVCERLLG
SGAAMVIETLSLCFHLTCFQCVGCQRHLGGTETGVQVRVRNRKPYCEPCYFQLKSPSM
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgccagcagaccagtgtcagctgtgcagacgccttcactgaagctcaacgt
tggattgaggaggtgaccggcaaatcatttggttgcaacgacttccgggctgcattggag
aatggagtcctgctttgtgacttgatcaatcagttgaaacctggaattataaagagggta
aacagactttctactccaatcgctggcctggataatgtgaccatctttctcaaagcctgt
gggaaactgggactaaatgtttctcagctgtttcatccaggagaccttcaggacctctcc
actcgtgctacactcagacgagatgaaagcaacaggagactcaaaaatgttctcatcaca
atctactggttaggtcgaaaagctcacttagatgccttctacagcggtccacagcttaac
ttcaaggcttttgaagggctgttggggttggccttatccaaggccttggatgagggtggt
aatgtgttcagagacagctgggaccaggagaaggaggaagacctgcataaaaggctgagc
tataggatggagaactgtggactcagcattgactctgtggagccccgagccctccgcccg
aacagtgaaggttgtggaagtgacgcagaggctgagcaggtgttcaaaatggaaaccaca
cagccctcgatgcagcaaaacagaggttatgtccctccacctctcctgcagaggaaacaa
ggacaggaagagaacggagttctttccaggagcaaatcactgagtgacattccaatggtg
taccctgtgcggaaagttcctgaagggcacaacctttatgatcgcatggaccgggatgcc
agcatgatggcacaagagtggaatcaggaaaacaaacgcaagtgcagcgtggctgccaaa
gacagtgaagctcagtggcaggatgacttgacaaagtggaagaaccgtcgtaggagcacc
aagtctgatgcacgcaggaagtctcaggacagagagcatgtcatcagccagatggtcaat
ggggtcaggactacatttgacagaaatggaggccaaggcggactgctgaaaggagagcag
ctgtcaccgcgcaggcataaccctgccccctgtccttactccacctctcctccatcaaaa
tcctcaagtttagacctgaagcctcgtacgagagctctactggcccgcagctacgccact
gagtcaccttactacagccccacagcgccactaacctcatcccagagtttgggatcatca
ggtggatccatgcccatctctgatgggatcatcccaggagaggaaacccaccatgcctcc
ctggcttcagatggagctggagttaccacacctactccagactgccctttcagctccaag
acccccatcagagcccagggctgtctggatcctttccagccgacaagtgagacagcccag
tccaactatgtcctcacaaaccaaatctccactctaaccacaactctgcagccggtcaaa
acagcagagtccaccagtacaagggtttcatcatacactaaaaaagttcctgctccctcc
cttgatgcaggacatcaatcaggagttgatcccctggaggacttgtcccaccacaaccat
gagactcagaaagagagtcagcatacactttgtgaaccagctgtggagatgggccaaggg
cagcaaagtgcaggaagctacaagtacttttccagagctgggtcttggtccggctcagct
agcctgcctcgtgggtacaggagatctgaaggatcatctcgtctctcctctgctatcact
gccagaccctttgggagtaagcagtccagagtttcctccctgccaagactgtgtgatgtt
gacaacaacgggagtctcctgatgaaatgcgagaaagaggaatatccctctccacctgct
gaatcttcgctcaaacgacagacagctactgcccacctgaagggtccgttccagactgca
atcacacagaggaaagagacacacctacagcagaatggtaaagctcatggagaggaggtg
aaaggtgtcactcttttgagccagaaatccttccagaccagcagctatcatcagctctcg
agccaaacccagcaactaccacagcccttttcaaaccccaatagaagctccaatctgcct
tcaaacacaagtactgatggcctaaaggcggaacacagtgacatgagagtgagccttact
ctcaaaccgaacagtcgaccagactttggtttccagactcgttgggactctactggagca
agagtcaaattcgttcagccaggcagcccagcagagcagtgccagctgtgtgtggacgat
gagatcgtggccattaacggggtcgcagtggcacacttaaacaacacccagtggatagat
aaaatgacatcttccctgcaaaccggcagtctgaccatggacattcggcgctatggcaac
aaggattggagcagcagtgaggggggtcaccacatccagccaggccagagcaggatgact
cttaatctgaccacagcagcgcccattctgataggttaccctgatcaccatgccaacagt
ggcgcctcttcagacaccacagtgaacgtgtcaaaattcaatgggcagagcgacaatgtg
atgcaaagtaaagtcatgaatggagagcatgctgacagccacaggacagccagaagtaaa
ggaggttcagaatcagcaatatctgatctccaggtgccatccatcagcccctcctccccc
agctggtcgtgggaccacgaggaggatcgaaggcgtcaggagaagtggcaggaagaacag
gagcgcctcctacaggagcagtaccagcgggatcaggagagacttgacgctgagtggcag
aaggctcaaagagatgcagtggggcagaacccatttgcctctgagatgacgaatggcaat
gggagctcttccagcaccctgcaccatgtgaacggattgacaaacaaaaccagagaagag
cagcagagccctgagagacgccagctgacagaagcaggatcaaagacacaaagtgattca
caaggactgcagcgggacaagatcaatgaacaagcctgggctgaggacgcatgtggcttt
gctcagctgtcgcctgcacacagggctaagtccttgtctaccccagcattggctggccct
cctaaacaaatgaaaggtgaaggaaggaaaagtttaggacactctgtgtctcaggtggag
aaggagagacagcagattttagaggagatgaagaaaaggacccatctcctgacggacaat
agctggatacgtcagcgcagcagcagtgtaaacaaggaaccggtctatgttggcgtccct
ctgaagaggtacgagtctttggataacctggacaccttccgtcaatcaccaatcctgagc
agtacattcagttaccctcgtccacactcagctgctgcaggttattgcgctcccaccagg
tactcgtcctcccgctacaacacaggatcagtacaaccccagagaaatccagctatggat
tccactcaaggcaggatcagtggcaggaggacttgctgtgtgtgtgagcgtctcctgggt
agtggggcagccatggtcatagagacccttagtctctgcttccacctcacctgtttccag
tgtgtgggctgccagcgacacctcggaggaactgagactggtgtccaggttcgagtccga
aacaggaagccctactgtgagccctgctattttcaactcaagtcaccctccatgtga
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