Halichoeres trimaculatus (threespot wrasse): 141788183
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Entry
141788183 CDS
T11192
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
htc03009
]
141788183 (ddx21)
03036 Chromosome and associated proteins [BR:
htc03036
]
141788183 (ddx21)
Enzymes [BR:
htc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141788183 (ddx21)
Ribosome biogenesis [BR:
htc03009
]
Eukaryotic type
Pre-60S particles
Helicases
141788183 (ddx21)
Chromosome and associated proteins [BR:
htc03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
141788183 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
DD_DDX21-DDX50
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
AAA_30
Motif
Other DBs
NCBI-GeneID:
141788183
NCBI-ProteinID:
XP_074523139
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MPSKIIFESEDQAMEENVETVFEAKPIKIKQGKKLKKMQLEDEIEQEDPDCEPPAPKKKK
KKDKLAGDQTDISTAEVIDMNGNINGVQSPKKKIKKIAVEDTEKKKKQKKVIAEAATNGH
STPNTPPETPSQSGEDSASDGEKEMELTPEQKEGAFSNFRISQVTIDKLKARGVTYLFDI
QVKTFNSVYDGEDVIAQARTGTGKTFSFAIPLVEKLQKDAVPPTRGRAPKVLVLAPTREL
AIQVAKDFKDIAKKLSLACFYGGSSYNPQIDAIRNGIDILVGTPGRIKDHIQNNKLDLSK
LKHVVLDEVDQMLDMGFAEQVEEILASSYSKDSDTNPQTLLFSATCPPWVYDVAKKYMRP
GCKHVDLIGKKTQKTATTVEHLAIACHWSQRAAVIGDVIQVYSGSHGRTIVFCETKKEAN
ELSLNTSIKQGSQSLHGDIPQKQREMTLKGFRNGAFEVLVATNVAARGLDIPEVDLVVQC
SPPKDVESYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYVENKAGITFRRVGVPTANDII
KSSSKDAVRFLDSVPVTAVGYFRESAQRLIEEKGAVEALAAALAHISGATSLEQRSLLSS
DAGYTTLQLVCSQEMHNLGYAWKTIKEQLGEEFENHIRGMTLLKGKMGVCFDVPVNKVKE
VQENWKDGRRWQLTVATELPELEEKQYNNRGDRGSAGGNRRGGFRGGRGRNFGGNGGRSG
GGFRNGGGFRSGGGGNRGGNKRSFSQAFNH
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcaaagatcatctttgaaagtgaagatcaagctatggaagagaacgtggaaact
gtctttgaggctaaacccataaagatcaaacagggcaagaagctgaagaaaatgcagttg
gaggacgagattgagcaggaggacccagactgtgaacctccagcaccaaagaagaagaag
aagaaagacaagctggctggggaccaaacagacataagcacagcagaggtcatagacatg
aatggaaacattaatggtgttcaatcgccaaagaagaagatcaagaagattgctgttgaa
gacacagagaaaaaaaagaagcaaaagaaagtaatcgcagaggcagcaaccaatggacat
tccacccccaacaccccccctgagacgccatcccagtccggtgaagactcggccagtgac
ggtgaaaaagaaatggagctgacaccggagcagaaagaaggggccttctccaacttcagg
atttcacaagtcaccattgataaacttaaagctcggggagtcacttacctgtttgacatt
caggtgaagacattcaattctgtatatgatggtgaagatgtaattgcccaagcccgaaca
gggacaggaaagactttctcctttgccattcccttggtggagaagcttcagaaggatgcc
gtgccacccactagaggccgtgcacccaaggtccttgtgttggctccaaccagagagttg
gctatccaggtcgcaaaagacttcaaagacatcgcaaagaaactgtccctggcctgtttc
tatggaggcagctcatacaacccacagattgacgccatacgtaacggtatcgacattttg
gttggaacccctggtcgcatcaaagatcacatccagaacaacaaactggacctctctaaa
ctgaaacatgtggttttggatgaagtggatcagatgctggacatgggatttgcagaacag
gttgaagagattttggcgtcatcatacagcaaagactcagacaccaaccctcagactctt
ctgttttcggccacctgtcccccctgggtctacgatgtggccaagaaatacatgagacca
gggtgcaaacacgttgacctgattggcaagaaaacacagaaaactgcaacaactgtggag
cacttagccattgcctgccactggtctcagcgtgcagccgtgataggtgatgtgatccag
gtttacagcggcagtcacggcagaacaattgtattctgtgagacaaagaaagaggccaat
gaactgtccttgaacacatccattaaacagggctcccagtctctgcatggtgacattcct
cagaaacagagagagatgaccctgaagggtttcagaaatggagcttttgaggttttggtg
gccaccaatgttgcagcccgtggattagacatccctgaagtcgacctggtggtccagtgt
tctccacccaaggatgtggagtcatacatccatcgctcaggacgtacaggccgagcaggc
aggactggagtctgcatctgtttttaccagaggaaagaggaggaccagctacgctacgta
gaaaacaaagcaggtatcacattcagacgggtcggtgttcccactgctaatgacatcatc
aaatcatcgagcaaggacgctgtcaggttcctggactctgttccagtcacagctgttgga
tacttcagagagtcagctcagagactcatcgaggaaaaaggagcagtcgaagcgctggct
gctgcccttgcacacatatctggagccacaagcctcgagcagaggtcactgctcagctca
gatgctggttacacaactttgcagctagtttgctctcaggagatgcacaatctgggttat
gcttggaaaaccatcaaagaacagctcggagaagagtttgagaaccacattagaggaatg
accctcctcaaaggcaaaatgggagtttgtttcgatgtcccagttaacaaagtcaaggag
gttcaggagaactggaaggatggtcggcgttggcagctgactgtagctacagagctccct
gagctggaggagaagcagtacaataaccgtggtgacagaggctctgctggaggaaacaga
agaggaggcttcagaggtggaaggggcagaaatttcggaggaaatgggggccgtagtggt
ggtggtttcaggaatggcggcggtttcaggagcggcggtggtggcaacagaggaggaaac
aaacgcagcttcagccaggcgtttaatcattaa
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integrated database retrieval system
