Halichoeres trimaculatus (threespot wrasse): 141788954
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Entry
141788954 CDS
T11192
Symbol
ddx10
Name
(RefSeq) putative ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
htc03009
]
141788954 (ddx10)
Enzymes [BR:
htc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141788954 (ddx10)
Ribosome biogenesis [BR:
htc03009
]
Eukaryotic type
90S particles
Helicases
141788954 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
141788954
NCBI-ProteinID:
XP_074524272
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
MTMMSYSRRQAPCPTLFTKLFLAWIFSSRNRQVRSFAMERKMKTPKALNLTVAVDPVRNL
EKWKKRYNKKKERVKKERAQRKKPEWQIEREYIAKLVSRYSDINAKEAVKFSDFPLSKKT
LLGLQEAQYRQPTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFLIPVLEGLYRLQWSSVD
GLGALIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKNESEKIHRTNIVICTPGR
LLQHMDETAAFTASDLHMLVLDEADRILDMGFADTLNAIVENLPKSRQTLLFSATQTKSV
KDLARLSLKDPEYVWVHEKAKFSTPATLEQSYVVCDLSQKVNMLYSFIRSHLKKKIIVFF
SCCKEVQYLFRAFCRLRPGMPILALHGKQQQMKRVEVYNDFTKKQNAVLFATDIAARGLD
FPAVNWVLQFDCPEDADTYIHRVGRTARYKEGGEALLLLLPTEEKGMVSQLQEKKVPINK
IQVNAEKVQNVQQKLEAFLAQEKEQKERAQRCFVSYLRSVYLMKNKEVFDVFKLQMKEYA
QSLGLAVAPRVRFLSKAQAQRAVKEEQGEEEESEEEDELKRFKAQLRGDVPPEDAQSSGS
DRSSHAEESSHDQEPQQAKITLMAAEDSDQDDNLKDVDLLTVKRKNVFNLEEYEESAASE
QISKNKAEKHSKFTEAKKALKRNFQLNTKVAFNEEGGAVQLWPPVQRAVTGGEDEEEEEV
SGINVEKAKERLRREDQEYDKQEYSRKVKAKHREKRLKAKAARREASKKPGPDSDEEDEV
VAYLANDSEDEFDPSTLPDPDKPHPEEEEEEEEEEARPAKRQHSSESSDDEEEELTAGRK
KRVRQEEDELTGLDTGLSLAEDEELVLHLLGGRV
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgatgtcatattcccggcgacaggctccctgccccacgctgtttaccaagctg
ttccttgcgtggatatttagctctcgtaacagacaggtcaggtcctttgccatggagaga
aagatgaagacacccaaagcgctgaacctgacagtcgctgtcgatcccgtcagaaacttg
gagaaatggaagaagaggtacaacaagaagaaagagcgggtgaagaaggagcgggcgcag
aggaagaagcccgagtggcagatcgagagagagtacatcgctaagctcgtcagcaggtac
agtgatatcaacgctaaggaggcggtgaagttctcggacttccccctgtcgaagaaaacc
ttgttaggtctgcaggaggctcagtacaggcagcccacagagatccagagacagaccatc
ggcttggcactgcaggggaaagatgtcctcggtgcggctaagaccggctccgggaagact
ttggcttttctgatacctgtgctggagggtctgtaccgcctacagtggagctccgtggac
ggcctcggtgccctaatcatttcccccacaagagagctggcctaccaaaccttcgaggtc
ctccggaaggtggggaagaaccacgacttctcagcggggctcatcatcggtgggaaggac
ctgaagaacgagtcggagaagatccaccgcaccaacattgtcatatgcaccccgggccgg
ctgctccagcatatggatgagacagccgcattcaccgcctccgacctccacatgctcgtc
ctggacgaggcggaccgcatcctggacatgggcttcgcagataccctgaacgccatcgta
gagaaccttccgaagtcacggcagacgctgctgttctctgccacccagacaaagtcagtc
aaagacttggcccgactcagcctcaaagacccggagtacgtctgggttcatgaaaaggcc
aagttcagcacaccggccacgctggagcagagctacgtggtgtgtgacctctcccagaag
gtcaacatgctgtactctttcatcaggagccatctgaagaagaagatcatcgtcttcttc
tcctgctgtaaggaggtgcagtacttgttccgggcgttctgccgcctcagacctggcatg
cccatcctggctctgcatgggaagcagcagcagatgaagagagtggaggtctacaacgac
ttcaccaagaagcagaatgcagtgctctttgccacagacatcgccgccaggggcctcgac
ttccctgctgtcaactgggtgctgcagttcgactgtccggaggatgcagatacctacatc
cacagagtggggcggactgcccggtacaaggagggtggggaggccctgctgctgctgctt
cctacagaagagaaaggcatggtcagccagctgcaggagaaaaaggtccccatcaacaaa
atccaggtgaatgcagagaaggtgcagaacgtccagcagaagctggaggccttcctggcc
caggagaaggagcagaaggaaagagctcagaggtgttttgtctcttatctgcgctcggtt
tacctgatgaagaacaaagaagtgtttgatgtctttaaactccagatgaaggagtacgcg
cagtctctgggattagctgtggctccgagggtgcgcttccttagcaaagctcaggcacaa
agagccgtgaaagaagagcagggagaggaagaggagtctgaagaggaggacgagctgaag
agattcaaggctcagctgagaggagacgttcctcctgaggacgctcagagttcagggtca
gaccgctcaagccacgctgaagagagcagtcacgaccaggagccacagcaggccaagatc
actctgatggcagcagaggacagcgaccaggacgacaacctaaaggacgtagacctgctc
acggtcaaaaggaaaaatgtctttaatctggaggagtacgaggagagtgcagcgtctgag
cagatctccaaaaacaaagctgagaaacactcaaagttcacagaggccaagaaagctctc
aagagaaactttcaactaaacaccaaggttgctttcaacgaggagggaggtgctgtacaa
ctctggcccccagtccaaagagcagtgactggaggagaggacgaagaggaggaggaggtc
tcaggtatcaatgtggagaaggccaaggagaggctgaggcgcgaggaccaggagtacgac
aagcaggagtacagccgcaaagtcaaagccaaacacagagagaagcgcctgaaggccaag
gcagcacggagggaggccagcaagaagccggggccggactctgacgaagaggacgaggtg
gtggcttacctggccaacgacagcgaggacgagtttgatcccagcacactgccagaccct
gataaacctcacccggaggaggaggaggaggaggaggaggaggaggccaggccagctaaa
cggcagcacagcagtgagagcagtgatgatgaagaggaggagctcactgcggggaggaag
aagagggtgaggcaggaggaggatgaactcacaggcttggacactggactctctctggct
gaagacgaagagctggtcttgcatcttttagggggacgggtgtag
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