Halichoeres trimaculatus (threespot wrasse): 141789104
Help
Entry
141789104 CDS
T11192
Symbol
lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03018
RNA degradation
htc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141789104 (lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
141789104 (lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htc03019
]
141789104 (lsm4)
03041 Spliceosome [BR:
htc03041
]
141789104 (lsm4)
Messenger RNA biogenesis [BR:
htc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141789104 (lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
141789104 (lsm4)
Spliceosome [BR:
htc03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
141789104 (lsm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
141789104
NCBI-ProteinID:
XP_074524515
LinkDB
All DBs
Position
Unknown
AA seq
145 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGAQQNKQQGKGRGGAGRGLFGGRGRGMSG
PGRGQQQQLQQDKKSGKPPGMKNQH
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgctacccctgtctctcctgaagactgcccagaaccatcctatgctggtggagctgaaa
aatggggagacctacaatggtcatcttgtcagctgtgacaactggatgaacataaacctg
agagaagtcatctgcacctccagggatggcgataagttctggaggatgcctgagtgctac
atcagagggagcaccataaagtatttgcgaatcccagacgagatcattgacatggtgaag
gaggaggtggtgtcaaaaggccgcggacgtggaggtgctcagcagaacaaacagcagggc
aaaggaagaggaggagctggtcgaggtctgttcggtggtcgtggcagaggaatgagtggc
cctgggcgaggccagcagcagcagctgcagcaggataagaaatcgggcaaaccaccaggg
atgaagaaccagcactga
DBGET
integrated database retrieval system
