Halichoeres trimaculatus (threespot wrasse): 141789135
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Entry
141789135 CDS
T11192
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03030
DNA replication
htc03410
Base excision repair
htc03420
Nucleotide excision repair
htc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141789135 (rfc4)
03410 Base excision repair
141789135 (rfc4)
03420 Nucleotide excision repair
141789135 (rfc4)
03430 Mismatch repair
141789135 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
htc03032
]
141789135 (rfc4)
03036 Chromosome and associated proteins [BR:
htc03036
]
141789135 (rfc4)
03400 DNA repair and recombination proteins [BR:
htc03400
]
141789135 (rfc4)
DNA replication proteins [BR:
htc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
141789135 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
141789135 (rfc4)
Chromosome and associated proteins [BR:
htc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
141789135 (rfc4)
DNA repair and recombination proteins [BR:
htc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
141789135 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
141789135 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_16
AAA_assoc_2
AAA_30
AAA_22
AAA_11
DUF815
AAA_24
Mg_chelatase
Gp44_lid
KH_DUF2096_C
SLFN-g3_helicase
AAA_19
AAA_14
AAA_28
RuvB_N
AAA_5
14-3-3
ResIII
Kinesin
Cdc6_lid
AAA_7
DNAX_ATPase_lid
AAA_3
DUF3244
Motif
Other DBs
NCBI-GeneID:
141789135
NCBI-ProteinID:
XP_074524550
LinkDB
All DBs
Position
Unknown
AA seq
359 aa
AA seq
DB search
MMQAFLKGATVQSTRPQKDKASAGTSSEKKAKAVPWVEKYRPKCVDEVAFQEEVVAVLKK
SLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVK
KFAQLTVAGTRSDGKPCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYIS
RIIEPLTSRCSKFRFKPLANQIQEERLLDICEKENLKFTKESIAALVQVSEGDLRKAITF
LQSAARLNVNKEITERSIIEIAGVVPTKMIDNLLQICFKGTFEKLEVAVKNMVDEGYAAT
QILSQLHESIIEKDLNDKQKSAITEKMAVVAKCLSDGADEYLQMLSLCSVIMQQASQNN
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggcgtttttgaaaggagcaactgttcagtctaccagaccccagaaagacaag
gcatcagcagggaccagctcagagaagaaagctaaagcagttccatgggtagaaaaatac
aggccaaagtgtgttgatgaggtggcctttcaggaggaggtggtagcagtgttgaagaag
tctctagaaggagctgatcttccaaacttacttttttatggacctcctggaacaggaaaa
acttcaaccatcttagctgctgccagagagctttatggtcccgagctgtacaggcagagg
gtgctggagctcaacgcctctgatgagcgaggtatccaggtggtccgagagaaggtcaag
aagtttgctcagctcactgtggctggcacgcgctcagatggaaagccgtgtcctccattt
aaaatcatcatcctggatgaggcagactccatgacggcaccggctcaggctgctctcagg
cggacaatggagaaggagtcccgaaccactcgcttctgccttatttgcaactacatcagc
aggattatcgagcctttgacctccagatgttccaagtttcgctttaaaccactggccaat
cagatacaagaggagcgcctgctggatatctgtgaaaaagagaatcttaagttcactaaa
gagagcatagcagcgttggtgcaggtgtctgagggagacctgaggaaagccatcaccttc
cttcagagtgctgcacgcctcaatgtgaacaaggaaatcacagaacgcagcatcatcgaa
attgctggggtcgttcctaccaaaatgattgacaacttgctccagatctgcttcaaagga
acgtttgaaaaactggaggttgcagtaaagaacatggtggatgaaggctacgcagctaca
cagatcctcagtcagctccatgagtccatcatagagaaggacctcaacgacaagcagaag
tcagccatcactgagaagatggcggtcgtggctaagtgcctgtcagacggtgccgatgag
tacctccagatgttaagtctgtgctcagtcatcatgcagcaggcttcccaaaacaactag
DBGET
integrated database retrieval system
