Halichoeres trimaculatus (threespot wrasse): 141789234
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Entry
141789234 CDS
T11192
Symbol
smx5
Name
(RefSeq) smx5
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03018
RNA degradation
htc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141789234 (smx5)
09123 Folding, sorting and degradation
03018 RNA degradation
141789234 (smx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htc03019
]
141789234 (smx5)
03041 Spliceosome [BR:
htc03041
]
141789234 (smx5)
Messenger RNA biogenesis [BR:
htc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141789234 (smx5)
mRNA degradation factors
5'-3' decay
Lsm complex
141789234 (smx5)
Spliceosome [BR:
htc03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
141789234 (smx5)
Complex C
U2 snRNP components
141789234 (smx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
141789234
NCBI-ProteinID:
XP_074524688
LinkDB
All DBs
Position
Unknown
AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEAMQQKQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgcttttctactcgtttttcaagtctctggtgggaaaggatgtggtcgtggagctcaaa
aacgacctgagcatctgtggaacactgcactctgtggaccagtacctgaacatcaagctc
acagacatcagcgtcacagatccagagaaatatccacacatgctctctgtgaaaaactgt
ttcatccgtggctctgtggtccggtacgtccagctgcccgcagatgaagtggacacgcag
ctgctgcaggatgctgcacgaaaagaagccatgcagcagaaacagtga
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integrated database retrieval system
