Halichoeres trimaculatus (threespot wrasse): 141789309
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Entry
141789309 CDS
T11192
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha isoform X1
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc04010
MAPK signaling pathway
htc04020
Calcium signaling pathway
htc04144
Endocytosis
htc04510
Focal adhesion
htc04540
Gap junction
htc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
141789309 (pdgfra)
04020 Calcium signaling pathway
141789309 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141789309 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
141789309 (pdgfra)
04540 Gap junction
141789309 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
141789309 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
htc01001
]
141789309 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
htc04090
]
141789309 (pdgfra)
Enzymes [BR:
htc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
141789309 (pdgfra)
Protein kinases [BR:
htc01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
141789309 (pdgfra)
CD molecules [BR:
htc04090
]
Proteins
141789309 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Ig_3
Pkinase
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
V-set
VEGFR-1-like_Ig-like
C2-set_2
Motif
Other DBs
NCBI-GeneID:
141789309
NCBI-ProteinID:
XP_074524788
LinkDB
All DBs
Position
Unknown
AA seq
1460 aa
AA seq
DB search
MDGVKVYVVFLAGLVTVTCGLKPPTIVSNQDEFMLQPNSVFNISCTGKKNVMWTEPLPKN
TFVYPGYYTATLFIYNATVENTGYYMCDYENQEGGPEGNEVGIYVFVPDVNAPFVPEPPE
NLIVPLEDPGVLISCRVSDPNSHVVLRSVSSGEEAQAYYESKMGFFGRLSPGQYQCETVV
NGEMMRSAVYTVETAAPTDMEDFSVEVKASEETLRAGQSLNVTCVAPAGPSFQQQWLHPK
KQAVDAIQLRHILPDRIIYTLSIPQATSQDSGIYECSVTNEINGEVRVGSAAVTVFEDNS
FVSLDHSGIIATEFVSLLEETEFTILISAYPAPKVMWLKDGKPLPESYYVLTKTSHVEGN
RYQSILTLRQPLVKDDGNYTITAVSGSRSAQFSFNLRVKAPTSAMFPPSSAPMLLPQVEE
LVVPLHTPFTLTCRGEAKLVWETPMDVPEKTQEDKSGLFVTTITVDNATAMHTGYYICFY
SRNDTDDGEDSSIYIYVPDPDVPFVPSPVPFANHVLFGHEEMEIQCRVSDPTANVTLVNF
DTLEPVPSVYDSKRGALGVFTAGTYACKALINGEVHYSGEYIVHGWTGSALHVELTAKRT
ALLVGDTLTVTCLARGSEILEDHWKYPSVLANRGVKTVHENKRDQEILYTLTIPHASTKD
SGIYSCSITDIITNESQTKQLAIQVYAGEFLSIRPEFKEYESAELDEVREFKALISSFPN
AHVTWLKDNVPLSDVTAEISTSLRQLSETSYMSVLTLIRAKEEDSGNYTMRVENGDQRSS
VGLKLEVKVPAVIVDLMDIHHGSASGQSVVCITRGQPTPVVEWFICKNIKHCANDTSSWV
PLPANSTEITVDSHKDEDNNLESQVMFGHLENTLAVRCLARNEMAAVSREVKLVSNGPHP
ELTVAAAVLVLLVIVIISLIVLVVIWKQKPRYEIRWRVIESVSPDGHEYIYVDPMQLPYD
SRWEFPRDRLVLGHILGSGAFGKVMEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMS
ELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRENFLSLNPEKTKK
ELDIFGINPADESSRSYVILSFESKGDYMDMKQADNTQYVPMLEMSNSSKYTDIQMSEYD
HPPSQKAEGEMDDLLSDDMNEGLSTTDLLSFTYQVAKGMEFLASKNCVHRDLAARNVLLS
QGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNLYTSLSDVWSYGILLWE
IFSLGGTPYPGMVVDSSFYNKIKSGYRMSKPEHAPSDVYEMMMKCWNSEPEKRPSFLGLS
DTVASLLPSSYRRHYERVNHEFLKSDHPAVTRVCIENDDAYIDIAYKNQGKLKDRESGFD
EQRLSSDSGYIIPLPDLDPISDDEYGKRNRHGSQTSEESAIETGSSTSTFAKREGETLED
ITLLDEMCLDCSDLVEDSFL
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atggatggggtgaaggtgtatgttgtcttcctggcagggctggttacagtgacctgtgga
ctgaagcctccgaccatcgtgtccaaccaagacgagttcatgctgcagccaaactctgtg
ttcaacatcagctgtacggggaagaagaacgtgatgtggactgaaccactgccgaaaaac
acctttgtgtacccgggttactacactgccacactctttatttacaacgctacggtagaa
aacaccgggtactacatgtgtgactacgagaaccaggagggtggacctgaaggcaatgag
gtcgggatctacgtctttgttccagatgtgaatgctccgtttgtccctgagccacctgag
aacctgatcgtccccctggaggatcccggagtcctcatctcctgccgtgtgtcagaccct
aactctcatgtcgtcctgaggagcgtctccagcggagaggaggcgcaggcttactacgag
agcaagatgggcttctttgggaggctgtcaccgggacagtaccagtgtgaaactgtggtg
aacggagagatgatgaggagtgctgtttacactgtggagactgcagcccccacagacatg
gaggacttcagtgtggaggtgaaagccagtgaggagacgctgagagccgggcagtctttg
aatgtcacttgtgtggctccagcagggcccagcttccagcagcagtggctccatccgaaa
aaacaggctgtggatgcaattcagctgaggcacattcttcctgaccgtatcatctacacc
ctcagtatcccacaagccacctctcaggacagcggcatctacgagtgctctgtcacaaat
gagatcaatggagaggtcagagtcggcagtgcggctgttaccgtctttgaggacaactcc
ttcgtgagtctggatcacagcgggattattgccacagagttcgtcagccttttggaggag
acagagttcactatcctcatttctgcttaccctgcccccaaagtgatgtggttaaaagat
ggtaaaccgttacctgagagctactacgtcctcaccaaaaccagccatgttgaaggaaac
cggtatcagagtattctgacgttacgacagccgctggtcaaagacgacgggaattacacc
atcacagctgtcagcggctctcgcagcgcccagttctccttcaacctaagagtgaaagct
cccacttcagccatgttccctccatcctcggctcccatgctgctgcctcaggtggaggag
ctggtggtgcccctccacactcccttcaccctgacctgtcgtggggaggctaaactggtt
tgggagaccccgatggacgtccctgagaaaacacaggaggacaagagcggcctcttcgtc
accaccatcacagtggacaacgccaccgccatgcacacgggttactacatctgcttctac
agcaggaacgacactgacgacggggaggacagcagcatctacatctacgtgccagatccc
gatgtgccctttgtgccatccccggtacctttcgcaaaccacgtcctcttcggccacgag
gagatggagatccagtgtcgagtctctgatcccactgctaatgtgaccctggttaatttt
gacaccctggagcctgtgccaagtgtctacgacagcaagaggggcgctctgggagtgttc
acagctggtacctacgcctgtaaggccctcataaacggggaggttcactacagcggggaa
tacatcgttcacggctggacaggcagtgcacttcacgtcgagctgacagccaaaagaacc
gccctgctcgtgggtgacactcttactgtcacctgtctcgctcgggggtctgagatcctg
gaagaccactggaaatacccgagcgtactggctaatcgtggcgtcaaaacagtgcacgag
aacaagagggatcaggagatcctctacactctgacaataccgcacgcttcaaccaaagat
agtggcatctactcctgctccattactgatatcatcactaatgagagccagacgaagcag
ttagccatccaggtttatgccggtgagtttctatcgatccgtccggagttcaaagaatat
gaatctgcagagctggacgaggttcgagagtttaaggctctgatcagctcgttccccaac
gctcacgtcacctggctcaaagacaacgtcccgctcagcgacgtgacggcagagatctcc
accagcctgcggcagctcagtgagaccagctatatgagtgttctcaccctgatacgagcc
aaggaggaggacagcgggaactacaccatgcgagtggagaatggagaccagaggagcagt
gtgggactgaagctggaggttaaagtgcctgcagtcatcgtggacttgatggacatccac
cacggctcagcctcgggacagtctgtggtgtgtatcaccagaggacagcccactccggtg
gtggagtggttcatctgcaagaacatcaaacattgtgccaatgacacatcctcctgggtg
cccctccctgccaactccacagagatcactgtggactcacacaaggatgaggacaacaac
ctggagagtcaggtcatgtttggtcacctagagaacacgttggccgtgcgctgcctggcc
aggaacgagatggcggctgtgagcagggaggtcaaactggtgtccaacggcccccaccct
gagctgactgtagctgcggccgtgctggtgctgctggtcattgtcatcatctcactcatt
gtgttggttgttatttggaaacagaaacctcggtacgagatccgctggagggtgatagag
tctgtgagtccagacggtcatgagtacatctacgtggaccccatgcagctcccctatgac
tccagatgggagttcccccgtgacagactggtcctcggtcatatcctcggctccggagcc
ttcgggaaggtgatggagggcactgcctatggtctgagccgctcccagcctgtcatgaag
gtggctgtgaagatgctgaaacccacagctcgctccagcgagaaacaggccctgatgtca
gagctgaagatcatgactcatcttggaccacatctcaacatcgtcaacctcctgggagcg
tgcaccaagtcaggccccatctacataatcacagagtactgcttctacggagacctggtc
aactacctgcacaagaaccgagagaacttcctcagcctgaacccagagaagactaaaaaa
gagctggacatcttcgggatcaaccctgctgatgagagtagccggagctatgtgatcctg
tcctttgagagcaaaggagactacatggacatgaagcaggctgacaacactcagtacgtc
cccatgctggagatgagcaactcctcaaagtacacagacatccagatgtccgagtacgat
caccccccttctcagaaagcagagggcgagatggatgacctgctgtcagacgacatgaac
gagggcctgtccaccaccgacctgctcagctttacctaccaggtggctaaagggatggag
ttcctggcctccaaaaactgtgttcatcgggaccttgctgccagaaacgttctgctctct
cagggaaagattgtgaagatctgcgactttggactggcccgggacatcatgcatgacaac
aactacgtctctaaaggaagtaccttcctgccagtgaagtggatggcaccagagagtatt
tttgacaatctgtacacctccctcagtgatgtgtggtcctatggcatcctgctctgggag
atattctccttgggtgggaccccgtaccccgggatggttgttgattcaagcttctacaac
aaaattaagagtggatacaggatgtccaaaccagagcatgctccgagcgacgtttatgag
atgatgatgaagtgctggaacagcgagccggagaagagaccgtcctttttgggtctgagt
gataccgtagcttctctgcttccctccagctacaggaggcattatgagagggtcaaccat
gagttcctgaagagcgatcatcccgctgtgacccgggtctgcattgagaatgacgacgca
tacattgacatcgcctacaagaaccaggggaagctgaaggaccgggagagcggcttcgac
gagcagcggctgagctctgacagcggctacatcatccccctcccagacctggaccccata
tctgacgacgagtatggcaagaggaacagacacggctctcagacgtccgaggagagcgcc
atcgagacgggctccagcacctccacctttgcaaagcgtgagggtgagactctggaggac
atcacgctgctagatgagatgtgtctggactgtagtgacctggtggaggacagcttcctg
tga
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