Halichoeres trimaculatus (threespot wrasse): 141790032
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Entry
141790032 CDS
T11192
Symbol
shoc1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
htc03036
]
141790032 (shoc1)
Chromosome and associated proteins [BR:
htc03036
]
Eukaryotic type
Meiosis-specific proteins
Others
141790032 (shoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
141790032
NCBI-ProteinID:
XP_074525765
LinkDB
All DBs
Position
Unknown
AA seq
1541 aa
AA seq
DB search
MMNFLALPTPYFTSSSDVYPHSGALPEVMYRTPWIRGKVISTCKLFISGSVLDDLRDKMH
PVIPLERFCSTLSEVRADVEVIPSSNPESPTDLDQEDFSLLKELQAIDLCQESFNKCATD
QMKPEHDKGLLLPEDLLVVDYLSHFRRHLPTLRAKLSRLRTLPVADPLLSSVSEDTLFRR
CASYEKPLDVNQSDTQVCTDIHEEFSKEAQMQEECLLLPAVVDTLSLSRDHCISFSSVCD
RMNVCPEQLDEQPSILGLLHKVFPSDASVSMDISRYEIPEESSIEARMIGGLMESEFGVR
LMLPTELELDVTLTSTPDRTSRTQICLSTRGLLKEELSPLCRCSLVSERTRRGMETALWK
AEKHLTSVVGFLLAEPRDNETPVDFQPLSEALKAVELESLNVVGFGKKTGDGHFKICSSF
EFTEKMRSVLSSKEQEEAEDFRKLTPQPVKLTDKHVLMSPTKRTQPPHLEGPETTPHVPK
VTADSSSLKRKATAFQNVFLMNPFNPKNIKPAALNNTDRVSPEINTDRVSPENNTDRVSP
EINTDRVSPEKSAAASGSPSDKRSIRGGWTEQKALTPQRAASSGENHRGLPGPRRPPEKD
LDPLSTFMMLRSQLKTSSAAEAQTSPRSPAEKVEKQTPPELQTPPDDPDETSERTPVYMS
HAVTGNATREQKAASQLTSSLLSQESRVVQVQAADSQQRAFFQLLAFAQPFLSSARQLGL
NIPAWGDFSCLAPDQTLFLLRQQEKALCRTQAQGAELVRDQELLFNRAALIHALVTFKEL
LLKCDLSTALAYLMQAAEVCTEPSLQQLVRRLQILFYLSHKNQEPNFKLLELQQLVAEWM
QSRTGQKIMEKVLVMISVDSDENRSVLITSLSQVTGGAVTAVCPEEDRKKLNGASVISSM
CDSVCVLVCEQHVGPDFPWRCFSLVVEYDHPGHSPWAAVCRERGVNHLTFNAIISHTETG
EDSWSLEENVPYVLFVTDGLLNCPLLLQTLESRFNITVLERSHSPSLQMLGGTHQYAVIT
VNESTAIVIQEEDELCQEHASERLVMRLTALSLQYDSCWLILHCPGFQGGGFPSDAFNSL
VLVYSSLVLFSVKSESLDVKVLIVPEVLEVAKWISQICLHSLMSSDRDPVEYLDKDWLAV
IPSEVINGPLTGIDLPALALTPTFLSLQEEKCVCQFPSVNPLVGQLMLSRVPSLQWLLRA
SLSQLQELLPEVPHKVLKLFSDTSLLYTTTDSDHSESQRVPPNSPWTTMSPHWGVSGRDS
EVVTSETPRFELSCSAPSFMFGADPGFCEPDLVIQDQSTDFRLDLSSSFSSPEGEPMRSW
TSRDLWREEEDRVGKEVEFCGWTGRAGASGRAVERRNTEWTPTKPDRPFRLDSVLGFSPL
QEQPAAGHMITAAYSGLQNPGGHGAVYGLSPHADAMMWSQGQSSRETTAASAQYGSRCWL
GQERKRSREEAGLMGTVLTPLKKGRLSYEKVPGRRDGQTRLSVWRECLSSRASRVKPAPP
GVIPRQRRPPGTSTPSLPQSLRGHIQHCLASINTPPAPLWF
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacttcctggcgttaccgactccttacttcaccagtagcagtgatgtgtatcct
cacagcggcgcgctgcctgaagtcatgtataggacaccgtggatcagaggaaaggtgatc
tctacctgcaagctcttcatcagtggctctgtgctggatgacctgagagacaaaatgcac
ccagtgattcctctagaaagattttgttcgactctgagtgaggtgagagcggatgtggag
gtgattcccagctccaatcctgagtccccgacagatctagatcaggaggatttttccctt
ttaaaagagttacaggccatagatttgtgccaggagtcctttaacaagtgtgcaacagac
cagatgaaacctgaacatgacaaaggtcttctcctgcctgaggacctcctggttgtggat
tacctgtcacactttaggagacatctacccacactgagagccaaactgtcccgactgagg
acacttcctgttgctgaccctctgctgagttcagtctctgaggacaccttgttcagacgc
tgtgcatcctatgaaaaacctcttgacgtgaaccaaagtgacactcaggtgtgcacagac
attcacgaggagttcagtaaagaggcacagatgcaggaagagtgtctgctgttgccagct
gtggttgacacgttaagtctgagtcgagatcactgcatcagcttttccagtgtttgtgat
cgtatgaatgtttgccctgaacagctggatgagcaaccctcaatcctggggctgcttcat
aaagttttcccatcggatgcttcagtatcgatggatatttccagatatgaaataccggag
gagtccagcattgaagccaggatgatcggaggcctgatggagtcagagtttggagtacgt
ttgatgcttcccactgagcttgaactggacgtgactctgacctcgactccagaccgaacc
agtcgaacccagatctgtctgtccacacgtggactcttaaaggaagagctgtctccgctc
tgcagatgctctttggtgtcagagaggactcgtagagggatggagacggctctttggaag
gcagagaaacatctgacctctgtggttggttttctgttggcagagccccgagacaatgaa
acacccgtggacttccagcctctgtctgaagccttgaaagcggtcgagttagaaagtctg
aatgtcgttggctttgggaagaaaacaggagacggacacttcaaaatctgcagcagcttt
gagtttacagagaaaatgaggtccgtgctctcctccaaagagcaggaggaggctgaagac
ttcagaaaactgacacctcaacccgtgaagctcacagacaaacacgtcttgatgagtccc
actaaaaggactcagccccctcacctggagggaccagaaaccacccctcatgtccctaaa
gttactgcagacagctcctctctgaaaagaaaggccaccgcatttcagaacgtcttcctg
atgaaccctttcaaccccaaaaacatcaaaccagcagctttgaacaacacagacagagtc
tcacctgagatcaacacagacagagtctcacctgagaacaacacagacagagtctcacct
gagatcaacacagacagagtctcacctgagaagtctgcagcagcgtcaggatctccatcc
gataaaagaagtatcagaggtggttggaccgagcagaaagccctcactcctcagcgggct
gcatcctccggagagaatcacagaggtctgccgggtccgaggcgccctccagagaaggac
ctggaccccctgtccaccttcatgatgctgagatctcagctgaaaacttcatcagctgct
gaagctcagacctcacccagatctccagcagaaaaggtggagaaacaaaccccacctgag
ctccagactcctccagatgatccagatgagacctcagagaggacaccggtctacatgagc
cacgctgtgacaggaaacgccaccagagagcagaaagcagcctctcagctgacgagctcg
ctgctcagtcaggagagccgggtcgttcaagtccaggccgcagacagtcagcagcgagcc
ttcttccagctgctggccttcgctcagccgtttttgagctcagccaggcagctcgggctc
aacatcccagcgtggggagacttcagctgcctggcccccgatcaaacactcttcctcctc
cggcagcaggagaaggcgctctgcaggacgcaggcacagggcgcagagctggtcagagat
caggagctgctcttcaaccgggcggctctgattcacgcgctggtgacgttcaaggagctg
ctgctgaagtgtgacctgagcacggctctggcctacctgatgcaggcggcggaggtgtgc
actgagccgagtctgcagcagctggttagaaggctccagatcctcttctacctcagccac
aaaaaccaggagcccaacttcaaactgctggagctgcagcagctggtggctgagtggatg
cagagcaggacggggcagaaaatcatggagaaagttctcgtcatgatatcagtcgactct
gatgagaacagatctgtactcatcaccagcttgagccaagttacaggtggagctgtgact
gcagtttgtccagaggaggacaggaagaaactcaacggtgccagcgtcatcagcagcatg
tgcgacagcgtgtgtgtgttggtgtgtgagcagcacgtgggccctgacttcccctggagg
tgtttctctctggtggtggagtacgaccacccgggtcactcgccgtgggccgccgtgtgc
agagagaggggggtcaaccacctcactttcaacgcaatcatctcacacactgagacggga
gaagactcgtggagcctggaggagaacgtgccgtatgtgttgtttgtgacagacgggctg
ctcaactgtcccctgctgctgcagacgctggagtcaaggtttaatataacggtgctggag
aggagccactccccctccttgcagatgctcggaggaacccatcagtacgccgtgatcacc
gtgaacgaaagcaccgccatcgtcatccaggaggaggatgagctgtgtcaggagcacgcc
agcgagcggctggtcatgaggctgacggctctgtctctgcagtacgacagctgctggctc
atcctgcactgccccggcttccagggaggaggtttccccagcgacgccttcaacagcctg
gtgctggtgtactcgtctctggtgttgttcagcgtgaagtcagagagtctggacgtgaag
gtgctgattgtgcccgaggttctggaggtggctaaatggatcagccagatctgcctccac
agcctgatgtccagtgacagggaccccgtggagtacctggacaaggactggctggctgtg
atcccctcagaggtgattaatggtccactcacagggatcgatcttcccgctctggctctg
actccgacctttctgtccctgcaggaggagaagtgtgtgtgtcagttcccgagcgtgaac
cctctggttggtcagctgatgctgagccgagtgccgtccctccagtggctcctgagggcc
tccctgtcccagctgcaggagctgctccctgaggttcctcataaagtgctcaagctgttc
agcgacacctccctcctgtacacaaccacagactcagaccactcagagtctcagagggtc
cccccaaacagcccctggaccaccatgagtcctcactggggagtttctggtagagactca
gaggtggtgacgtctgaaactcctcgctttgagctttcctgcagcgcccccagtttcatg
ttcggagcagatcccggcttctgtgagccagacttagtgattcaggatcagagcacagat
ttcagactggacctgagctcctccttcagcagcccagaaggtgaacccatgaggagctgg
accagcagagacctgtggagggaggaggaggacagggtggggaaggaggtggagttttgt
ggctggacaggccgagctggagcctcagggagagccgtggaaaggagaaacaccgagtgg
actccgacaaagccggacaggcctttcagactggactctgtgctgggcttcagtccgctc
caggagcaaccagctgctggtcacatgatcacagcagcctacagcggcctccagaatcca
ggcggccacggcgcggtgtacggtctgagccctcacgcagacgccatgatgtggagtcag
ggtcaaagcagcagagagacgaccgcagcgtccgctcagtacggatccagatgctggtta
ggacaggagaggaagaggagcagggaggaggcgggcttgatggggacagtgttgactcca
ctgaagaaaggacgtttgagctacgagaaagtccccggccgacgcgacggacagacgagg
ctgagcgtgtggagagagtgcttatcttcacgagccagcagagtgaagccagctccccca
ggagtgatccccagacaaagacgacccccggggacatcgactccaagcctcccccagtct
ctgcgcggacacatccagcactgcctggcctccatcaataccccgccagctcctctctgg
ttttaa
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